Collimonas arenae: LT85_4937
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Entry
LT85_4937 CDS
T03512
Symbol
potB
Name
(GenBank) Spermidine Putrescine ABC transporter permease component PotB
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
care
Collimonas arenae
Pathway
care02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
care00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_4937 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_4937 (potB)
Transporters [BR:
care02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT85_4937 (potB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF6126
DUF4064
Motif
Other DBs
NCBI-ProteinID:
AIY44095
UniProt:
A0A0A1FK33
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All DBs
Position
complement(5514244..5515539)
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AA seq
431 aa
AA seq
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MTSIASSVGVNPMPMAPPAAPPNSQLKRELRQAQFRKRAAALALIAPLAIFLLLTFLVPI
AMLLKRAVENPEIATTLPHTVAALAGWDRKSSPPDAAYAGLATDLLQAREDSSAGSLARR
LNSEISGARSIIMKTARALPLLDADGKPLPPAQIKQALIDIDEQWNQLPYWQVIAKNGAP
YSPYYLLAALDLKQDAFGHIEKADPDASVYQKIFGRTFWMGLVATLACLVLGYPLAYWLS
TMSERRANLFMILVLIPFWTSILVRVAAWIVLLQSEGLVNKALMATGLTQAPLELLFNRI
GVYIAMTHILLPFMILPLYSVMKAIPPTYMRAAVSLGSHPFAAFWRVYVPQTYPGIGAGA
LLVFILSVGYYITPALLGGPNEQMVSYYIAYFTNVTINWGMACALGALLFAATLVLYGVY
RRFTKTDVSMA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacttctattgcatcctccgtcggcgtcaacccgatgccgatggcgccgccggcagcg
ccgcccaactcgcagctcaagcgtgaattgcggcaagcgcaattccgcaagcgtgccgcg
gcgctggcactgatcgcaccgctggcgattttcctgctgctgactttcctggtgccgatc
gccatgctgcttaagcgcgccgtggagaacccggaaatcgcgacgacgctgccgcatacc
gtggccgccctggccggctgggatcgcaagagcagtcctccggacgccgcctatgccgga
ctggcgacggatctgctgcaggcgcgcgaagacagttctgccggatcactggcacgccgc
ttgaattcggaaatttccggcgcccgttccatcatcatgaaaaccgcgcgcgccttgccc
ttgctggatgcggacggcaagccgttgccgcctgcgcagatcaagcaggcactgatcgat
atcgatgagcagtggaatcaattgccgtactggcaggtgatcgccaagaatggcgcgccg
tactctccctattacctgctggcagcgctggacctgaagcaagacgctttcggccatatt
gaaaaagccgatccggatgcctcggtgtatcaaaagattttcggccgcaccttctggatg
gggctggtcgccacgctggcttgcctggtgctcggctatccgctggcctattggctgtcg
accatgtctgagcggcgcgccaacctgttcatgatcctggtgctgattccattctggacc
tcgatcctggtgcgggtcgcggcctggatcgtgctgctgcaatcggaagggctggtcaat
aaagccttgatggcgaccggcctgacgcaggcgcccttggagctgctgttcaaccgcatc
ggcgtctacatcgcgatgacgcatatcctgctgccattcatgatcttgccgctgtatagc
gtgatgaaggcgattccgccaacctatatgcgtgcggcggtgtcgctcggcagtcatccg
tttgcagccttctggcgcgtgtatgtgccacagacctatccgggtatcggcgccggcgcc
ttgctggtgtttatcctttcggtcggttattacattacgccagccttgctaggcgggccc
aacgaacagatggtcagctattacatcgcttactttaccaatgtcaccatcaactggggc
atggcttgtgcgctcggcgctttgctgtttgctgcgacgctggtgctgtacggcgtgtat
cgccgctttacaaaaaccgacgtgagcatggcttaa
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