Collimonas arenae: LT85_4966
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Entry
LT85_4966 CDS
T03512
Name
(GenBank) Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
care
Collimonas arenae
Pathway
care02010
ABC transporters
care02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT85_4966
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_4966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_4966
Transporters [BR:
care02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LT85_4966
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF1611_N
Motif
Other DBs
NCBI-ProteinID:
AIY44124
UniProt:
A0A0A1FKC2
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Position
complement(5541603..5542817)
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AA seq
404 aa
AA seq
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MNIKLKTLAVAVSSTIALGVALPAAAQISGDVVKIGFITDMSSVYSDIDGPGGAEAIKMA
IADMGGSINGKKIELVVADHQNKADIASSKAREWFDQQGLDMLIGGTNSGTALAMAKIAA
EKKKPFFEIGAGSTRLTNEECTPYTVHYAYDTYALAHGTGSQVVKQGGKSWYFITADYAF
GASLEKDTTAVVKASGGTVLGSVKHPLNASDFSSFMLQAQSSKAQIIGLANAGGDLINAV
KAANEFGVTKNAKLAGLLVFINDIHSLTLKQTQGMYLTDSWYWDQNAESRAWAKRYFEKM
KKEPSSLQAGDYSAAMQYLTAVKAIGTDDGDKVMAQLRKSKFNDMYAKNAYLRPDGRVVH
DMMLYQVKAPADSKYPWDYLNKIETIPGEQAFTPKAESKCTLWK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaattaaagacgttggcagttgcagtgagcagcacgatcgccctcggtgtt
gcgttgcctgcagcagcgcagatttctggcgatgtggtcaagatcggtttcatcaccgac
atgtcgagcgtctattcggatatcgacggccctggcggcgctgaagcaatcaagatggcg
attgcggatatgggcggcagcatcaacggcaagaagatcgaactggttgtggcagaccac
cagaacaaagcggatatcgcttcgagcaaagcacgcgagtggttcgaccagcaaggcctg
gacatgctgatcggcggcaccaattccggtaccgcattggcgatggcgaaaatcgcagca
gagaagaagaagccgttctttgaaatcggcgccggcagcacccgcctgaccaatgaagaa
tgcacaccttacaccgtgcactatgcttacgatacctacgccctggcgcatggcacaggt
tcgcaggtggtgaagcagggcggcaagagctggtatttcattaccgccgattacgcgttc
ggcgcctcgctggaaaaggacaccaccgcagtagtgaaggcctccggcggcacggtattg
ggttcggtcaagcatccgctcaacgcctccgatttttcttcgttcatgttgcaggcgcaa
tcgtccaaggcacagatcatcggactggcgaatgctggcggcgacttgatcaatgcagtg
aaggcagcgaatgaattcggcgtcaccaagaatgccaagctggccggcttgctggtgttc
atcaacgacatccattcgctgacgctgaagcagacgcagggcatgtacctgaccgacagc
tggtactgggatcagaatgccgaatcgcgcgcttgggcgaaacgttattttgagaagatg
aaaaaagaaccttccagcttgcaggcaggtgattactcggcagcgatgcaatacctgacc
gctgtcaaagccatcggcaccgacgacggcgacaaggtcatggcgcagctgcgcaagagc
aagttcaacgatatgtatgcgaagaacgcttacttgcgtcctgacggccgtgtggtgcac
gacatgatgctgtaccaggtcaaggcgccggccgattcgaaatatccttgggactatctg
aacaagatcgagaccattccaggcgagcaggcgttcacgccgaaggctgagagtaaatgc
acattgtggaaataa
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