Collimonas arenae: LT85_5018
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Entry
LT85_5018 CDS
T03512
Symbol
yidC
Name
(GenBank) Inner membrane protein translocase component YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
care
Collimonas arenae
Pathway
care02024
Quorum sensing
care03060
Protein export
care03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LT85_5018 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LT85_5018 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_5018 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
care03029
]
LT85_5018 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
care02044
]
LT85_5018 (yidC)
Mitochondrial biogenesis [BR:
care03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
LT85_5018 (yidC)
Secretion system [BR:
care02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LT85_5018 (yidC)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
AIY44176
UniProt:
A0A0A1FHX2
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Position
complement(5600451..5602136)
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AA seq
561 aa
AA seq
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MDIKRTVLWVVFSVSLLFLWDQWQRHNGQPSLFFPGTTQTAPAATGPTGPANAAAGASAS
TDVPQASASGAPAASASAVPAVAAADVKGQIITITTDVVKADIDTIGGELKRLELLKQKD
TVDSSKNLVLFDSSATRTYLAETGLIGGPFPNHKSLFTALPGARTLDNGNQVQLVLESTE
GGVKLTKTFTFTRGDYSIDVKHTVTNDSGAPISPSLYLQLVRDGNAPEGEQRFVHTFTGA
AVYTDGSKFQKFTFDKIEGGKADHATKSDDGWFALIQHYFVSAFIPQGNSPREIFTKKLA
TNLYAVGNILPMGTIAPGASVTMDARLYSGPEETAVLEKIAPGLTLVKDYGWQKIIAEPI
FWLMTQIHKALGNWGWTIIALTVLIKLAFFPLSAASYRSMAKMKLVTPKMTSIRERFKSE
PQKMNQAMMELYKTEKINPLGGCLPIVIQIPVFLSLYSVLLSSVEFRNAPWLGWIHDLAA
PDPFYILPVLMAVSMFIQTKLNPTPPDPMQAKVMLFMPLIFSVMFFFFPSGLVLYWVTNN
VLSIAQQWVITRKMGTAPAKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaacgtaccgtcctgtgggttgtattttcggtctcgctattgttcctttgg
gaccagtggcagcgccataacggccagccttcgctgttcttcccaggcactacccagact
gctcccgctgctaccggccctaccggccctgcaaatgcagccgccggcgctagcgccagc
accgatgtcccgcaagcttcagctagcggtgcgccagccgcatcggccagcgccgtgccg
gctgttgccgctgctgacgtcaagggccagatcatcaccatcactaccgacgtcgtcaaa
gccgacatcgataccattggcggcgaactgaaacgcctggaactgttgaaacagaaggac
actgtcgattcgtcgaagaacctggtgttgttcgattccagcgcgacccgtacctacctg
gctgaaaccggcctgatcggcggtcctttccctaaccacaagtcgctgttcacagccttg
cctggcgcacgtacgctggacaacggcaaccaggtgcaactggtgctggaatcgaccgaa
ggcggcgtcaagctgaccaagacctttactttcacccgcggcgactactcgatcgacgtc
aagcacaccgtcaccaacgacagcggcgcgccgatttcgccttcgctgtacctgcaactg
gtgcgtgacggcaatgcgcctgaaggcgagcagcgttttgtacataccttcaccggcgct
gcggtatataccgatggcagcaagttccagaaattcactttcgacaaaatcgaaggcggc
aaggctgaccatgcgaccaaatccgacgatggctggtttgcattgatccagcattacttt
gtgtcggcgttcatcccgcaaggcaattcgccacgcgaaatcttcacgaagaaactggcg
accaacctgtatgcagtgggtaacatcctgccgatgggcacgattgctccgggcgccagc
gtgaccatggatgcgcgtttgtattccggtccggaagaaaccgccgtgctggaaaagatc
gctcctggcctgacactggtcaaggattatggctggcagaaaattatcgctgaaccgatt
ttctggctgatgacgcagatccacaaggcgctgggcaactggggctggaccatcatcgct
ctgacggtgctgatcaaactggcgttcttcccactgtcggctgccagctatcgcagcatg
gcgaagatgaagctggtgacgccgaagatgacatcgatccgcgagcgcttcaagtctgag
ccgcaaaagatgaaccaggcgatgatggagctgtacaagaccgagaagatcaacccgctc
ggcggctgtctgccgatcgttatccagattcctgtgttcctgtcgctgtattcggtattg
ctgtcgagcgtggagttccgtaacgcgccgtggctgggctggatccacgatctggctgca
cccgatccgttctacatcctgccggtgctgatggctgtgtcgatgttcatccagaccaag
ctgaacccaacgccgcctgatccgatgcaagcgaaggtgatgttgttcatgccgctgatt
ttctcggtcatgttcttcttcttcccgtcgggcctggtgctgtactgggttaccaacaac
gtgctgtcgattgcgcagcaatgggtaattacccgcaagatgggaacggctcctgcgaaa
gcataa
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