Clostridium argentinense: RSJ17_00620
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Entry
RSJ17_00620 CDS
T05123
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carg
Clostridium argentinense
Pathway
carg03420
Nucleotide excision repair
carg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ17_00620
03430 Mismatch repair
RSJ17_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_00620
Enzymes [BR:
carg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ17_00620
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ17_00620
MMR (mismatch excision repair)
Other MMR factors
RSJ17_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARC83184
UniProt:
A0A7I6N0W9
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All DBs
Position
pRSJ17_1:complement(136051..137781)
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AA seq
576 aa
AA seq
DB search
MKMRKDLLKGLNDEQVNAVISKNNRILCLAGAGSGKTTVLTRRTGYIFMSRVSPKNIACI
TFTRAAGLEMKKRFINIDEKKGKDIFCNTFHKFCMSILMKFGYLICLDKNFSIVDQEERN
LILEDLSKKLKYKSNIKSVVKKIEQYHKYEYEAGIKERSLIDSYLNYLKENNECDIDLIL
YFAYYLLREFKEVENYYHNTYKYICIDEYQDNNDIQEMIIEKINPENLFVVGDDRQSIYG
FRGSNVNHIISFETRYNNCEVTKLTTNYRSTQNIVDASNKLIKNNKKQLSIEMKSLKHGQ
DINIISSKDIYEEIKNIVLILTSLDDIKYRDMAIIARTNKELDVVEKSLALYKIPYLRNK
KAAIDRTILNIISAIYNPKDNAKIYNMALLKIDENTLRELKIKSLEKSVYLWDVIEDYDP
KFAKDIIKIRSITDPVEAVKNIIKYFNLKNKEFIELVKEWVEEKELENNKNINTLIKDFY
FLSEILPKKEDIDGINLSTVHGSKGLEWHTVAIIGLSEGNFPSSRVNIDMEEERRLAYVA
FTRAKERLILSYHNTGLDYRGRSKELNISRFINEIR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaggaaagatctattaaaagggcttaatgatgaacaggtgaatgcagttata
agtaaaaataatagaatactatgtctagcaggtgctggttcaggaaaaacaacagtgtta
actagaagaactggctatatttttatgagtagagtatctcctaaaaatatagcttgcata
acattcacaagagctgcagggcttgaaatgaaaaaaagatttataaatattgatgagaaa
aagggaaaagatatattctgtaatacatttcataagttttgtatgtccatacttatgaaa
tttggatatttaatctgccttgataagaattttagtattgtggatcaggaagaaagaaat
cttatactagaagatttgtctaaaaagttaaagtataaaagcaatataaaaagtgtggta
aaaaaaatagagcagtatcacaaatatgaatacgaagctggaattaaagaaagatcttta
atagatagttatttaaactaccttaaagaaaacaatgaatgtgatatagatttaatttta
tattttgcatattatcttttgagagaatttaaagaggtagaaaattattatcacaataca
tataagtatatatgtatagatgaatatcaggataataatgatattcaagaaatgataata
gaaaagataaatccagagaacctatttgtggtaggggatgatagacaatctatttatgga
tttaggggctcaaatgtgaatcatattatatcatttgagaccaggtataataattgtgaa
gtaactaagcttacaactaactatagaagcacacagaatatagtagatgcttctaataag
ctaataaaaaataataaaaaacaattatccatagaaatgaagtcgctaaaacatggccaa
gatattaatattatttcgtcaaaagatatatatgaggaaataaaaaatatagtattaata
ttaacttctcttgatgatattaaatatagagacatggctattatagcaagaacaaataaa
gaattagatgttgtagaaaaaagtttagctttatataagattccttatttaagaaataaa
aaggctgctatagataggacaatccttaatataatttctgcaatttataatcctaaggat
aatgctaaaatttataatatggcattattaaaaatagatgaaaatacattaagagaacta
aagataaaaagtttagaaaaatccgtatatttatgggatgtaatagaagattatgatcct
aaatttgcgaaagatataattaagattaggtccataacagatccagtggaggcagttaaa
aatattataaaatattttaatttaaaaaataaagaatttatagaactagtaaaggaatgg
gtggaagaaaaagaattagaaaataataaaaatataaatactctgataaaagatttttat
tttttatcagagatattaccaaaaaaagaagatatagatggaatcaatctttcaacagtt
catggtagtaaaggccttgagtggcatacagtcgctataataggattaagtgaggggaat
tttcctagttctagagtaaacatagacatggaggaagagagaagattagcgtatgtagca
tttaccagagctaaggaaagattaatattaagttatcataatacgggattagattataga
ggtaggtccaaagaacttaatattagtagatttatcaatgaaataaggtag
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