Clostridium argentinense: RSJ17_01390
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Entry
RSJ17_01390 CDS
T05123
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
carg
Clostridium argentinense
Pathway
carg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RSJ17_01390
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carg01007
]
RSJ17_01390
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carg03016
]
RSJ17_01390
Enzymes [BR:
carg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RSJ17_01390
Amino acid related enzymes [BR:
carg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RSJ17_01390
Transfer RNA biogenesis [BR:
carg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RSJ17_01390
Prokaryotic type
RSJ17_01390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF883
Motif
Other DBs
NCBI-ProteinID:
ARC83301
LinkDB
All DBs
Position
complement(152853..154130)
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AA seq
425 aa
AA seq
DB search
MLDLKRIRNNIEEIKKALNDRGENFDISVIDEVVALDKRRRDILVEVEELKNKRNTQSSQ
IPKLKKEGLPVDNIMAEMKELADKIKNFDLELSETDERIKYIMLRIPNIPNPEVPSGNTD
EDNVEVRKFGEPRKFEFEPKEHWTLGTEKGILDFEAGGKVTGSRFTVYKGLGARLERAII
NFFLNKHIDENGYTEILPPFMVNRNSMTGTGQLPKFEEDAFKVSDTDYFLIPTAEVPVTN
LFRDEIIEGDKLPIKYAAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFVKPEDSYKE
LESLVNDAESVLKALGLPYRLVKICKGDLGFTAAFKYDLEVWMPSYNRYVEISSCSNFED
FQARRANIKYKDDAKSKPNFVHTLNGSGVAIGRTVAAILENYQNADGTITIPEVLRPYMG
GREVM
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaattcgtaacaatattgaagaaataaaaaaagcgcttaatgat
agaggagaaaattttgatataagtgttattgatgaggttgtagctttagataaaagaaga
agagatatattagttgaggttgaagaattaaaaaataaaagaaatactcaatcatctcaa
attccaaagcttaaaaaggaaggtttacctgttgataatataatggcagaaatgaaagag
cttgctgataaaattaaaaactttgatttagaactttcagaaacagatgaaagaataaaa
tatataatgcttagaatacctaatataccaaatcctgaagttccgagtggaaatactgat
gaagataatgtagaagtaagaaaatttggtgagccaagaaaatttgaatttgagccaaaa
gagcattggactttaggaacagaaaaaggaatattagattttgaagcaggtggaaaagtt
actggttcaagatttacagtatataaaggattaggtgctagattagaaagagctataata
aacttctttttaaataagcatatagatgaaaatggatatacagaaatattaccaccattt
atggttaatagaaatagtatgacaggaacaggacaacttccaaagtttgaagaagatgct
tttaaagtttctgatacagattactttttaataccaacagcagaagtacctgttacaaat
ctttttagagatgaaataatagaaggagataagcttccaataaaatatgctgcttatagt
gcttgttttagatctgaagcaggctcagcaggaagagatacaagaggacttgtaagacag
catcaatttaataaagtagagcttgttaaatttgttaaaccggaagattcttataaggag
cttgaaagtcttgtaaatgatgcagaaagcgttttaaaagcattaggacttccttataga
ttggttaagatatgtaaaggtgatttaggatttactgctgcatttaagtatgatttagaa
gtttggatgccaagctataatagatatgttgaaatttcaagctgtagtaattttgaagat
ttccaagcaagacgtgcaaatattaaatataaagatgatgctaaaagtaaacctaatttt
gtacacacattaaatggctcaggtgttgctataggaagaacagtagctgctatacttgaa
aactatcaaaatgctgatggaacaattacaattccagaggttttaagaccatatatgggt
ggaagagaagttatgtag
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