Clostridium argentinense: RSJ17_04110
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Entry
RSJ17_04110 CDS
T05123
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carg
Clostridium argentinense
Pathway
carg03420
Nucleotide excision repair
carg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ17_04110
03430 Mismatch repair
RSJ17_04110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_04110
Enzymes [BR:
carg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ17_04110
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ17_04110
MMR (mismatch excision repair)
Other MMR factors
RSJ17_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
PhoH
ResIII
DEAD
AAA_11
AAA_30
AAA_12
AAA_14
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ARC83767
LinkDB
All DBs
Position
728423..729952
Genome browser
AA seq
509 aa
AA seq
DB search
MMPNKEQEVIITHFTRNAEGKRILLVEAPPGTGKTYTAVSASINYIRCSKQQDSKYNKKV
LILTFSKNARVQIEKQLDDLDNGNIKLSSYIEVSNFHSFFQKYVWSYSNYLSLTKNLIIT
SPKQRRLHLERALSQISDYTGDDNQYGWVESLLEGEFYPLTPKGNIKPVVKKLIPYKEDI
QNGIMQLNKEGYIGFSDIGYYMNKLLDKSPSLLKTIQNKYPLIILDEYQDASDLQDKIVK
KLVGQSNNAIFFSDSKQMIYGWRGASPNRIKNLLEEYGDQIEQRELVTAMRFKDRKDIES
ILKTAREETYDINSFVSSENVKYIKIKVRDKNLFSTQSKNIMYSNLKYKIINALPQFQER
KDKSIGILCRYNEQVRFIKKALREEFNIYSQTISNNEEEHNIVCDLIDFWSKQENGISID
ELSQEIVKYIFSVIYDDGIGAIKRNKLGNIGYSNLKNARLPILKQVASYVEKGAESREYF
CCLYKCVNLVMDSELSINPGNMSLIRKVL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaataaagaacaggaagtaataattactcattttactagaaatgcagaggga
aaaagaattctgttagtagaggctcctccaggaactggaaagacatatacagcagtttct
gcttctatcaattatatacgttgtagtaaacagcaggattctaaatataataagaaagtg
cttatacttacattttctaagaatgcaagagtacaaattgaaaaacagttagatgactta
gataatggtaatattaagttatcaagttatattgaggtttcaaattttcattctttcttc
caaaagtatgtatggtcatatagtaactacttaagtctaactaaaaatctaattattact
tcaccgaaacaaagaagattacatttggaaagagcactctcacagatatctgattatact
ggagatgataatcaatatggatgggttgaatctcttctagaaggtgaattttacccactt
acacccaaagggaacattaagccggttgttaaaaagttgattccctataaggaagatata
caaaatggtattatgcaactaaataaagaaggatatatagggttttccgatataggctat
tatatgaataaattgttagataagtctccctctttattaaaaactattcagaataaatat
ccacttattattttggatgagtaccaagatgcttctgatttgcaggataaaatagtaaaa
aagttagttgggcaaagtaataatgcgatatttttttcagattcaaaacaaatgatatat
gggtggaggggtgcatcccctaatagaattaagaacttgttagaggagtatggagatcag
atagaacaaagggaacttgttaccgctatgagatttaaagatcgaaaagatattgaaagt
atacttaaaaccgctagagaagaaacttacgatataaacagttttgtatcttcagaaaat
gttaagtatataaaaataaaagttcgagataagaatttattttctacgcaaagcaagaac
attatgtattcaaatttaaagtataagataataaatgctttaccacagtttcaagagcga
aaagataaatctataggaattttatgcagatataatgaacaggtccgttttattaagaaa
gccctaagagaggaatttaatatatattcacaaacaattagtaataatgaggaagaacat
aatatagtatgtgatttaatagacttttggtcaaaacaagaaaatggaatatcaatagat
gaactaagtcaggaaatagttaagtatattttttcggttatatatgatgacggtattgga
gccataaagcggaataagctaggtaatataggatattcaaatcttaaaaatgcaaggtta
ccaattttgaaacaagttgcctcttatgttgagaaaggcgctgaaagcagagaatatttt
tgttgtttatataagtgtgtaaacttggtaatggatagtgaattgagcataaaccctggt
aatatgtctttaataagaaaggttttataa
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