Clostridium argentinense: RSJ17_05340
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Entry
RSJ17_05340 CDS
T05123
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_05340
Enzymes [BR:
carg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ17_05340
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RSJ17_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_19
ELMO_ARM
Motif
Other DBs
NCBI-ProteinID:
ARC83992
LinkDB
All DBs
Position
1009659..1013096
Genome browser
AA seq
1145 aa
AA seq
DB search
MSLRFIFGGAGSGKSYRCIEEIKRKKEDEVEHPLILLVPEQISFRAEKWLIEKIGATGIN
NIYVLSFKRMAYTILNEVGGITHSHMSPTGKAMIIDRIMKEVHEDLKIFSLASRQKGFVE
TISEMINEFKRYNISIETLNILKEDVNHSSLLTDKLSDISLIYSKYEEILKRGYFDPEDD
LTILYEKIDESKLFKGAEIWIDEFSGFTPQQYKIIEKLLKNCRKVNITLPYEGSDAKGIR
EGEIDNTNAFYTVYYTEKTILKIAGENNVGYDKPLILKGNPRNEYNYRFINSEELGYLEK
NYFEANFKPYEGDTKDIKIFKALNTYSEVEYVAREILTLCREKNYRFNDIAVVARDLNSY
EEIVKVIFDEYEIPHFLDRKKDIENNPIIILIKSSLEIFTKNFSYESVFRYLKSGLLDLT
YDEVDILENYVLAYGIKGKKRYVNDDYWNDETVKEIKNKFISPLINFRDKITNRSYVKDI
CKAIFEFLEEIEIYEKLTIWIENFKEDKNLIAVNEYSSIWNLLIELLDQFVEVLGEEILP
LDEFIDIFSIGISTHEIGLIPPALDQVIVGNIDRIRTHEIKVLYVIGVNDGVFPKIINEE
GIFSDMDRAVFEGNGIKLANDTKALAFAEQYLIYATLAVPSEKLCLSYPIANFEGKTLRP
SIIIPRMKSIFKNIKEESNISELWEQHNSIEKVAAKLPSFNELIMEIRKFIDSNEISPLW
EEIYRWFMEEEEFREKSKTIFEGFSYTNIINAINSEKIRKLYGGNNYFSVSKIEKYAQCP
FAYFIQYGLKAKERKIYNFSAPDLGTFMHNVLDTFSKKIEKDNLKWKDLNKEYCEKNIEY
IVELMVSEDKSFVLNSSARYKYITERLKRVLIRAVLVIVEQLRVSGFEPHGYEISFGLKD
TDYPPIVLKLSSGETVRLMGRIDRIDKFVSNNEVYYRIIDYKSGNKEFKLSDVYYGLQVQ
LLTYLDAILSNEEKNNTFSKPAGVLYFKIDDPIIAIKKGASDKEIEEELLKELKMKGLLI
KDIEILREMDNTMDNGNNSSVIPVGIKKDGELTSASSVISYEGFNALRNHVKKELAKSCE
EMLSGEIGIKPYKRGGENPCDFCKLSPICQFDLSFEENKFRLIKDKRDKEILEILEKKGD
SSNEQ
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaagatttatatttggaggagctggtagtggaaaaagctatcgttgtattgag
gaaataaaaagaaaaaaagaggatgaagtagaacatccattaattttattagtaccagag
cagatctcttttagagcagaaaaatggttaatagagaaaataggggctacaggaataaat
aatatatatgtacttagctttaagagaatggcatataccattttaaatgaggtaggtgga
atcactcattctcatatgagcccaacaggtaaggcaatgattatagatagaataatgaag
gaagtgcatgaggatttaaaaatattttctttagcttcaaggcaaaaaggctttgtagaa
actatttctgaaatgataaatgaatttaaaagatacaatatttctatagagaccttaaat
atattaaaagaagatgtaaaccatagttcgttacttacagataaactttcagatatatca
ttaatttatagcaagtacgaagaaatattgaaaagaggatattttgatccagaggatgat
ttaactatcctttacgagaaaatagatgaaagcaaattatttaaaggagcagagatatgg
atagatgagttttcaggctttactcctcaacagtataaaattattgaaaaacttcttaaa
aattgtagaaaggttaatataactcttccttatgaaggcagcgatgctaaaggtataagg
gaaggagaaatagataatacaaatgctttttatactgtgtactatacagaaaaaactata
ctaaaaatagcaggagaaaataatgttggctatgataaaccattaattttaaagggaaat
ccacgaaatgaatataactatagatttataaattcagaggaattggggtatttagagaaa
aattattttgaggcaaactttaagccttatgaaggtgatacaaaggatataaagattttt
aaagctttaaatacatattcagaagttgagtatgtggctagagaaatattaacgctttgt
agggaaaaaaattatagatttaatgacatagctgtagttgctagagatttaaattcatat
gaagaaatagtgaaagttatttttgatgaatatgaaattccacattttttagatagaaaa
aaagatatagaaaataatccgattattatattaataaaatcttcgcttgagatatttaca
aagaattttagttatgaatcagtatttagatatttaaaaagtggacttttagatttaacc
tatgatgaagttgatattttagaaaactatgtattagcttacggaataaaaggtaagaag
agatatgtaaatgacgattattggaatgatgagacagtaaaagagattaaaaataaattt
ataagcccacttattaactttagagataaaattactaatagaagttatgttaaagatatt
tgtaaagcaatttttgaatttttagaggaaattgaaatttatgaaaagcttactatatgg
attgagaattttaaagaagataagaatttaatagcagtaaatgagtatagttcaatatgg
aacttgctaattgaacttttagatcaatttgtagaagttttaggcgaagaaatattgcca
ctagacgagtttatagatattttttccattggaatatcaactcatgagataggattaatt
cctccagcgctggatcaggttatagtaggtaatatagaccgtataagaactcatgaaata
aaagtactttatgttataggagttaatgatggagtatttcctaaaattataaatgaagaa
ggtatttttagcgatatggatagagctgtttttgaaggtaatggtattaaacttgccaat
gacactaaagcactagcctttgcagaacaatatttaatatatgcaaccttggctgtccct
agtgaaaagctatgccttagttatcctattgcaaattttgaaggtaagaccctaagacct
tctataattattcctagaatgaaatctatatttaaaaatattaaagaagaaagtaatata
tcagaactatgggaacagcataatagcatagaaaaagtggcagcaaaacttccgtctttt
aatgaacttattatggaaataagaaaatttattgacagtaatgaaatttctccattatgg
gaggaaatatatagatggtttatggaagaagaagagtttagagaaaaaagtaaaactatt
tttgaaggtttttcttatacaaatattatcaatgctattaacagtgaaaaaataagaaaa
ctttatggcggaaataattattttagtgtttctaaaattgaaaagtatgctcaatgtccc
tttgcttattttattcaatatggtttaaaagcaaaagagagaaaaatatataatttttca
gcaccagatttaggaacctttatgcataacgtattagatactttttcaaagaaaattgaa
aaggataatcttaaatggaaagatttaaataaggagtattgtgaaaaaaatatagagtat
attgtggaacttatggttagtgaggataagagttttgttttaaatagttctgctagatat
aagtatataactgaaagattaaaaagagttttaattagagctgtgctagtaattgttgag
caacttagagtaagtggatttgaaccacatggctatgaaatttcttttggtcttaaggat
acagattatccgcctatagtacttaaactttcaagtggagaaactgtaaggctgatggga
aggatagatagaattgataaatttgtaagtaataatgaggtttattacagaattatagat
tataagtctggtaataaagaatttaaacttagtgatgtttactatgggcttcaagtgcag
ttattaacctatcttgatgcaattttaagtaatgaggaaaaaaataatacattttcaaaa
ccagcaggagtgttgtactttaagatagatgatcctattattgctattaaaaaaggagca
agcgataaagaaatagaggaagaacttctaaaagaattaaaaatgaagggtcttctaatt
aaagacatagagattttgagagaaatggataatactatggataatggaaacaactcttct
gtaataccagtaggaattaaaaaagatggagaacttacctctgcctcttctgttatatct
tatgaaggattcaatgcacttagaaatcatgtaaaaaaggaattagctaaaagttgtgaa
gaaatgctcagtggagaaattggtataaaaccttataaaagaggaggggaaaatccatgt
gatttttgtaaactttctcctatatgtcaatttgatttatcctttgaagaaaataaattt
agattaataaaagataaaagggataaagaaatattagaaatactagaaaagaaaggagat
agtagtaatgagcagtaa
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