Clostridium argentinense: RSJ17_05380
Help
Entry
RSJ17_05380 CDS
T05123
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_05380
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RSJ17_05380
Archaeal homologous recombinant proteins
RSJ17_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
Phage_ABA_S
Motif
Other DBs
NCBI-ProteinID:
ARC84000
LinkDB
All DBs
Position
1024114..1027263
Genome browser
AA seq
1049 aa
AA seq
DB search
MKPIKLTLNAFGPYRDKTIIDFTLLENRNIFLITGNTGAGKTTIFDGINFALYGDASGSE
RDGKSLRSDFADIDELTYVELEFKLRNHIYFLRRVPPQLTKKKRGDGTTEFKGEAELKCL
TNDEFKIITGLDKVTKKVEELLGINNKQFKQIIMIPQGEFRKLLTADSKERGDILQKIFQ
TECYRSIQEKLKRKVQDINKNTSMANERRNVYIKNIDAYENTVLKELILEQNPNMDKIQE
NLISLLHEDKVLEENILKYIKSIEEKISEKSREIDKAEEVNKKLKEKEEITLKRIQLENE
KKTYEKLEIDLNRARNAESIKPIEENYIQRKDSVDNRVKEISNLEDTLVEYEKQLKISEE
KYNFEKSKEEERNSLIEYGTTLKSYMDKVKKIDEYKISASRLNIMLKNIDGELKSSNEKL
EKIKIDEVNIRKKTEEGTKASIEIATINSLLKEKEAIRKKLLNLHDDNKEFLAYSAKFKE
FKIEYDTIEQEFKAAKEKLNMLQEKFLKGQAAIMAMVLKDGEECPVCGGTSHPKKAVNNV
NVPKEEEINLARDHFEKLDMRYREELEKYNKLQEKLKLKKEEIEKKKHEIMEEKIANFGE
AIESDLTELIINKGKSIKIEIDQLNNRFIELKTKSELLNKLKIEEENLIREKEQLEKKIK
VLEESKVETYGENEKVKEKLEGILREVPSEIQSEEALNIVINETRNKFLILKKSFEEAEE
NYNKYKTYYEKLKTSRDEKIKILEEEKKLLEKSNNQYLESILKGGFNSVNEYKACKKNSQ
DIVRLDTAIQNYKQELKSIVDRYEIIILQTKELQIIDIEELKKELDLLILEKEKITEERN
KVFARIKNNSEVLENIRKINEELKDFEEKYRVIADLSNAANGFTTIKTTFERYVLASFFE
EIIGAANIRLRKMTSNRYELNRTDEGKIASSQSGLDIEVFDNYTGKARPAKTLSGGEGFK
ASLALALGLADVVEGNAGGVNIDTMFIDEGFGTLDPESLDVSINCLLELQDAGKLVGIIS
HVPELKERIEGRLEVISTSRGSSAKFNIK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctataaaacttactttaaatgcatttggaccttatagagataagacaattata
gattttacattacttgagaatagaaatatatttttaattacaggaaatactggagctgga
aagacaacaatttttgatggaataaattttgcactttatggagacgctagtggctcagag
agagatggaaaaagtcttagaagtgactttgcagatatagatgaacttacttatgtggaa
ttagaatttaaacttagaaatcatatatattttttaagaagagtaccacctcagctcact
aaaaagaaaagaggagatggcacaacagaatttaagggagaggcagagttaaagtgttta
accaacgatgaatttaaaattataactggtcttgacaaagttactaaaaaagtagaagaa
cttctaggcattaataataaacagttcaagcaaataattatgatacctcaaggagagttt
agaaagcttttaactgctgatagtaaggaaagaggagatatacttcaaaagatttttcaa
acagagtgttatagaagtatacaagaaaagcttaaaaggaaagtacaggatataaataaa
aatacatctatggctaatgaaagaagaaatgtatatataaaaaacattgatgcttatgaa
aacacagttttaaaagagctaatactagagcaaaaccctaatatggacaaaattcaggaa
aacttaatttcattattacatgaagataaagttttagaagaaaatatattaaaatatatt
aaaagcattgaagaaaagataagtgagaaatctagagaaatagataaggctgaagaggta
aataaaaaattaaaagaaaaagaggaaataactttaaaaagaattcagcttgaaaatgaa
aagaaaacctatgaaaaattagagatagatttaaatagagcaagaaatgcagaaagtatc
aaacctatagaagaaaattatattcaaagaaaagatagtgtagataatagggtaaaagaa
ataagtaatttagaggatacactagtagaatacgaaaaacaattaaaaatatctgaggaa
aagtataactttgagaaatcaaaagaagaagaaagaaattctcttatagagtatggaaca
acacttaaatcatatatggataaagtgaaaaaaatagatgaatataaaatttctgcaagt
cgtttaaatattatgttgaagaatatagatggagaattaaaaagttctaatgagaagtta
gaaaaaattaaaatagatgaagtaaatataagaaaaaaaacagaagaaggaactaaggct
tctattgaaattgccactataaattctctattaaaagaaaaagaagcaattagaaaaaaa
ttattgaatcttcatgatgataataaagaattcttagcttatagtgcaaaatttaaagag
tttaaaatagaatatgatactattgaacaagaatttaaagcagctaaagaaaaattaaat
atgttacaagaaaaattcttaaaagggcaggcagctataatggctatggtattgaaagat
ggggaagaatgtcctgtatgtggaggtacaagtcatcctaaaaaggcagttaataatgtg
aatgtaccaaaagaagaagaaataaatctagctagagatcattttgagaaacttgatatg
agatatagagaagaattagaaaaatataataaattacaagaaaaacttaaacttaaaaaa
gaagaaatagaaaagaaaaagcatgaaataatggaagaaaaaatagcaaatttcggtgaa
gcaatagaaagtgaccttacggaattaataattaacaaaggtaagtcaataaaaattgaa
attgatcagttaaataatagatttatagaattaaaaactaagtcagaattgttgaataag
ctaaaaatagaagaggaaaatcttattagagaaaaagaacagttagagaaaaagataaaa
gttttagaggaaagtaaagtagaaacttatggggaaaatgaaaaggttaaagaaaaatta
gaaggaatcttaagagaagtacctagtgaaatacaaagtgaagaagcattaaatattgtt
ataaatgaaactagaaataaatttttgatacttaaaaaatcatttgaggaagcagaagaa
aattataataaatataaaacttactatgagaaacttaagacctcacgggatgaaaagata
aaaatattagaagaagaaaaaaaattattagaaaaaagcaataatcaatatttagaaagt
atattaaaaggtggatttaattctgtaaacgaatataaagcttgtaagaaaaatagccaa
gacatagtaaggctagatacagctattcaaaattataaacaagagttaaaatctatagtt
gatagatatgaaataataattttacaaactaaagaacttcaaattatagatattgaagaa
ttaaaaaaggaacttgatttgcttatattagaaaaagaaaagattacagaggaaagaaac
aaagtatttgctagaattaaaaataatagtgaagttttagaaaatataagaaaaataaat
gaagaactaaaagactttgaagaaaaatatagagttatagcagatttatctaacgcagcc
aatggatttactaccatcaaaactacttttgaaagatatgtacttgcttctttttttgaa
gaaatcataggagcagctaatattagattaagaaaaatgacatctaatagatatgagtta
aatagaacggatgaaggaaaaattgctagcagccaaagtggacttgatatagaggttttt
gataactacacaggaaaggctagaccagcaaaaactttgtctggcggagaaggatttaaa
gcctctttagctttagcactaggacttgcagatgtagtagagggtaatgctggcggagta
aatatagacactatgtttatagatgaaggttttggcacattagacccagaatccttagat
gtctctataaattgtttattagaactacaagatgcaggtaaattggtgggaataatatct
catgtaccagaattaaaagagagaatagaaggtagattagaggttatatctacttcaaga
ggaagtagtgcaaaattcaatataaaataa
DBGET
integrated database retrieval system
