Clostridium argentinense: RSJ17_05620
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Entry
RSJ17_05620 CDS
T05123
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
carg
Clostridium argentinense
Pathway
carg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ17_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_05620
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ17_05620
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSJ17_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
DnaJ_CXXCXGXG
APS_kinase
ATPase
AAA_21
NMDAR2_C
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ARC84044
LinkDB
All DBs
Position
1082427..1085249
Genome browser
AA seq
940 aa
AA seq
DB search
MRDKIFIKGAKVHNLKNVDLEIPRDKFVVFTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGQMNKPEVEYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGTPH
CPKCGKEITQQTVDQIVDRIMGLEERTKLQILSPIVRGKKGEHVKILENIKKNGYVRARI
DGNLVDLVEDEIKLEKNKKHTIEIVIDRLVIKNGIEARLNDSLETALKLGEGLVIVNIID
GEDILFSEHFACADCGISIGELSPRMFSFNSPFGKCDSCDGLGTLMEIDENLVIPDRSKS
IMDGAIITFGEGSLKEDSWTFSVLKALSKEYKFSLDTPIEELPEEVVNVLLYGTEGHRIK
VEYTKELKTGVYNHAYEGVINNLKRRYFETSSDYIKREIEQYMSDNPCPKCKGARLSKEA
LSVTVGEKNIHEFSSMSILDEISYLDNLKLSEKNMIIAAQILKEIRNRLNFLKDVGLDYL
NLTRSAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDKLIKTLEHLRDLG
NTLVVVEHDEDTMKAADHIVDIGPRAGEHGGEIIASGTIEDIMSCENSITGQYLSGKKKV
ELPNEYRKSDGRFIKIIGGKQNNLKNVSVDFPLGVFTSVTGVSGSGKSTLVNEILYKGLN
KIINNSKKIPGLHKEILGHEQIDKIINIDQSPIGRTPRSNPATYTGVFDLIREVFAVTPE
AKMRGYKPGRFSFNVKGGRCEACRGDGIIKIEMQFLSDVYVPCEVCKGKRYNRETLEVKY
KGKNIDDVLEMTVEEALKFFENIPRIYTKMQTLMDVGLGYIKLGQPSTTLSGGEAQRIKL
AYELSKRSTGKTLYILDEPTTGLHIDDVNKLISILQRLVEGGNTVVVIEHNLDVIKCSDY
IIDLGPEGGDKGGTILCTGNPMDICNCNKSYTGQYLKKMI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgagagataaaatttttataaaaggagcaaaagttcataatttaaaaaatgttgattta
gaaataccaagagataaatttgtagtttttactggcttatcaggttcaggtaaatcttct
cttgcttttgatacattgtatgcagaaggtcaaagaagatatgtagaatctctttcagct
tatgcaagacaatttttaggacaaatgaataaaccagaggttgaatatatagaaggacta
tctccagctatatctatcgaccaaaagaccacaagtagaaatcctcgttctacagtaggt
accgtcacagaaatatatgattatttaagattattatatgcaagagtaggtacgccacat
tgtcctaaatgtggtaaagaaattactcaacaaactgtagatcaaatagtggatagaatt
atgggtttggaagaaagaacaaaacttcaaatcctgtcacctattgttagaggaaaaaag
ggagaacatgtgaagatactggagaacatcaaaaagaatggctatgtaagagctagaatt
gatggaaatttagtagatttggttgaagatgagattaagcttgaaaaaaataaaaaacat
actattgagattgtgattgataggctagtaattaaaaatggaatagaagctagactaaat
gattctttggaaacagcgctaaaacttggagaagggttagtgattgttaatataattgat
ggtgaggatatattatttagcgaacattttgcctgtgcagattgtggtataagtataggg
gagttatctccaagaatgttttcatttaattcaccttttggaaaatgtgatagctgtgat
ggattaggaacgcttatggagatagatgagaatttagttattcctgatagaagtaagagt
atcatggatggcgctattataacttttggagaaggcagtttaaaagaagattcatggaca
ttttctgtgctaaaagcattatcaaaagaatataaattttcattagatacacctatagaa
gaattgccagaagaagttgtaaatgtgttattatatggaacagaaggacatagaattaaa
gtagaatacactaaagagcttaaaacaggtgtttataatcatgcttatgaaggagttata
aacaatttaaaaagaagatattttgaaactagttcagactacataaaaagagaaatagag
caatatatgagcgataatccatgtccaaaatgtaagggcgcaagattaagcaaagaggcc
ttgtctgttactgtaggggaaaaaaatatacatgaattttcttctatgtctatattagat
gaaatatcatatttagataacttaaaactttcagaaaaaaatatgataatagctgctcaa
atattaaaagaaataagaaatagattaaatttcttaaaggatgtaggattagattattta
aatttaactcgttctgctggaacactatctggaggagaagctcaaagaataagacttgca
actcaaattggatctagtttaatgggcgtactatatatactagatgagccaagcatagga
cttcatcaaagagataatgataagttgattaaaactttagaacatcttagagatttaggt
aatactttagtggttgttgaacatgatgaggatactatgaaagcagcagatcatattgta
gatataggtcctagagcaggtgaacatggtggcgagataatagcttctggtaccattgag
gatattatgagctgtgaaaattctattacaggacaatatttaagtggtaaaaagaaagta
gaattacctaatgaatatagaaaatcagatggaagattcattaaaattataggtggtaag
caaaataatttaaaaaatgtttctgtagattttccactaggtgtatttacatctgtaact
ggagtttcaggttcaggtaagagtactcttgtaaatgaaatactttataaaggacttaat
aagataataaataattctaaaaaaattccaggattgcacaaggaaattttaggtcatgag
caaatagataagataattaacattgaccaaagtccaataggaagaactcctagaagtaat
cctgctacttatactggtgtttttgatttaataagagaagtatttgcagtaacacctgaa
gctaaaatgagaggatataagccaggacgttttagttttaatgtaaaaggtggcagatgt
gaagcttgtagaggagatggaataattaaaatagaaatgcaatttttatctgatgtttat
gtaccttgtgaagtatgtaaaggaaaaagatacaatagagaaacattagaagttaaatat
aagggtaaaaatatagatgatgttttagaaatgacagtggaagaagcactaaagtttttt
gaaaacattcctaggatatacactaagatgcaaacattaatggatgttggattggggtat
attaagttaggtcagccttctactaccttatccggtggggaagcgcaaagaataaaatta
gcttatgagttatcaaaaagaagtacaggaaaaactctttacattttagatgagcctact
acaggacttcatatagatgatgttaataaacttatatctatacttcaaaggttagtagaa
ggcgggaatacagtggtagtaattgagcataatctagatgtaattaaatgttcagattat
attattgacttaggtcctgaaggtggagataaaggtggaactattttgtgtacaggaaat
cctatggacatatgtaactgtaataagtcttacacaggacaatatcttaaaaaaatgata
taa
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