Clostridium argentinense: RSJ17_08665
Help
Entry
RSJ17_08665 CDS
T05123
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
carg
Clostridium argentinense
Pathway
carg00260
Glycine, serine and threonine metabolism
carg00460
Cyanoamino acid metabolism
carg00630
Glyoxylate and dicarboxylate metabolism
carg00670
One carbon pool by folate
carg00680
Methane metabolism
carg01100
Metabolic pathways
carg01110
Biosynthesis of secondary metabolites
carg01120
Microbial metabolism in diverse environments
carg01200
Carbon metabolism
carg01230
Biosynthesis of amino acids
carg01240
Biosynthesis of cofactors
carg04981
Folate transport and metabolism
Module
carg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RSJ17_08665
09102 Energy metabolism
00680 Methane metabolism
RSJ17_08665
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSJ17_08665
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RSJ17_08665
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RSJ17_08665
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RSJ17_08665
Enzymes [BR:
carg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RSJ17_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
DegT_DnrJ_EryC1
DUF4456
Motif
Other DBs
NCBI-ProteinID:
ARC84597
LinkDB
All DBs
Position
1757969..1759201
Genome browser
AA seq
410 aa
AA seq
DB search
MNLTYLEKMDKELLELINQEQQRQEEHIELIASENFVSRSVMEAAGSVLTNKYAEGYPNK
RYYGGCFVVDKIEDLARDRMKKLFGADHANVQPHSGSQANMAVYLTVLKPGDTVLGMDLS
HGGHLTHGSPVNFSGLLYNFVSYGVNSETETIDYEELRKLALESKPKLIVAGASAYSRII
DFKRIREIADEVGAYFMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAVLC
KEEFAKALDKSVFPGMQGGPLMHIIAAKAACFKEAMEEDFKAYMEQVVKNAKVLSDELTK
YGFRIISGGTDNHVMLVDLTNKELTGKDAEKLLDSIGITVNKNTIPFETKSPFITSGIRI
GTPAVTTRGFKEEEMREVARLINEAIDNREGDLSPIKAKVHELCKKCPLY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaacttatttagaaaaaatggataaagagttacttgaactaataaaccaagaa
caacaaagacaagaagaacatattgaacttattgcttcagaaaactttgtttctagatca
gtgatggaagctgctggctcagtattaacgaacaaatatgcagaaggatatccaaataag
agatattatggtggatgctttgtagtggacaagattgaagatttagcaagagacagaatg
aaaaaactatttggtgctgatcatgctaatgttcaaccacattcaggttcacaagctaat
atggctgtttatttaactgtattaaaaccaggggatacagttctaggaatggatttaagc
catggaggacatttaactcatggaagtccagtaaacttttcaggtttattatataacttt
gtttcttatggagttaatagtgaaactgaaactattgattatgaagagttaagaaaatta
gcattagaatctaaacctaagctaatagtagctggtgctagtgcttattctagaataata
gattttaagagaattagagaaattgctgatgaagtaggagcttactttatggtagatatg
gcacatattgctggtcttgtagcaacaggcttacatccatcaccagtaccatacgcagac
tttgtaactactactactcataaaacattaagaggtcctagaggtggagcagttttatgt
aaagaagagtttgctaaagcattagataaatctgtattcccaggaatgcaagggggacca
ctaatgcatataatagcagctaaagcagcatgtttcaaagaagcaatggaagaagacttt
aaagcttatatggaacaggtagttaagaatgctaaagtgcttagtgatgaattaactaag
tatggatttagaataatttctggtggcactgacaaccatgttatgcttgtagatttaact
aacaaagaattaactggtaaggatgctgagaagcttcttgattctattggaattacagta
aataaaaacactattccatttgaaactaaaagtccatttataactagtggaataagaata
ggtactccagcagttacaactagaggtttcaaagaagaagaaatgagagaagttgcaaga
cttataaatgaagctatagacaatagagaaggagatttaagtccaataaaagcaaaagta
catgagctttgtaaaaaatgcccattatattaa
DBGET
integrated database retrieval system