Clostridium argentinense: RSJ17_11710
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Entry
RSJ17_11710 CDS
T05123
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carg
Clostridium argentinense
Pathway
carg03420
Nucleotide excision repair
carg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ17_11710
03430 Mismatch repair
RSJ17_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_11710
Enzymes [BR:
carg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ17_11710
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ17_11710
MMR (mismatch excision repair)
Other MMR factors
RSJ17_11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C_2
AAA_30
DEAD
ResIII
SLFN-g3_helicase
PhoH
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ARC85113
LinkDB
All DBs
Position
complement(2444672..2446954)
Genome browser
AA seq
760 aa
AA seq
DB search
MAIEKSELNLELKKFEEVKDWVIMEEHKTSKKYKEYEEKIFDLKKSSGGSFSNDLILAER
IFQFTKKNLNKYKEASKQPYFARIDFREKRYDTETFYIGKFGLNDELKSEEIVIDWRAPI
ANLYYSGTHGESHYISPEGIIEGELKLKRKFLVRDKKLIDAFDEGINEIILKSSMEGNEL
IDEFLKINLEQSISSKLKDVVATIQKEQNEIIRAYKNKAMIIQGSAGSGKTTVALHRLAF
LVYTYNEILEHEEILVVAPNEIFLDYISEVLPNLGVYTVNQSTFESLCASIINYKGRIYT
RDKKLSYLMEESDDEDKKYLTAVSKIKGSLSFKAILDRYVKYLEKKDVEVDDIRIDEYIL
YSSKEIKKLYIRDLKHLPIVKRKDEINRYFKQKLKDKLENVQNQIEANYSFKIKDIKAKE
NLNDEEKRKIIIELYDERDKFIKELKQKGNKALKDFFNSWQNEELISTYYNLYSNEEIFN
EITDKKIPSKLVKYIVNSSEKNIRDKIIDSEDLPHIVYLKMALEGVDSKYIHVIVDEAQD
YSYFEMLILKLLSKQNSLTIVGDLGQGIYSHKGIDSWEKLIATVFEDDATYVSLTQSYRS
TVEIIDFANIVLDKQRLNLIPAKPVLRHGDKPKITKIENTLDGINEIDKIVEEVENINKK
TVAIICKTYKQCVDVLKGLKVQSNYQWSIVDENDSSIKGNRIIIPSYMTKGLEFDATIVY
NCDEENYGENNLDKKLLYVNLTRALHREYIMYKKSLSKLL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggccatagaaaaaagtgaactgaacttagaacttaaaaagtttgaagaagttaaagat
tgggttattatggaagaacataagacctcaaagaaatataaagaatatgaagaaaagatt
tttgatttgaaaaagtctagtggcggaagttttagtaatgatttaatattagcagaaaga
atttttcaatttacaaaaaagaatttaaataagtataaggaagcgagtaagcaaccttat
tttgcaagaatcgattttagagaaaaacgatatgatacagaaactttttatattggaaaa
tttggattaaatgatgaattaaaaagtgaagaaattgtaattgattggagagcacctatt
gctaatttatattacagtggaactcatggtgaatcacattatatatctccagaaggtata
atcgaaggagagttaaaacttaaaagaaaatttttagtaagagataaaaaacttatagat
gcttttgatgaaggaataaatgaaatcatattaaagagcagtatggaaggtaatgaatta
atagatgaatttttaaagataaatcttgaacaaagcataagtagcaagcttaaggatgta
gttgccactatacaaaaggaacaaaatgaaataataagagcatataaaaataaagctatg
ataatacagggatctgctggttctggaaaaactaccgttgcactacataggctagctttt
ttagtatatacatataatgaaattttagagcacgaagaaatacttgtggtagcacctaat
gaaatatttttagattatatttctgaagtattacctaatttaggtgtgtataccgttaac
caaagtacttttgaaagcttatgtgcatcaataataaactataaaggtagaatttatact
agagataaaaaattatcttatttaatggaagagagtgatgacgaagataaaaaatattta
actgccgtaagtaaaataaaaggctctttaagttttaaagctatattagatagatatgta
aaatatctagaaaaaaaagatgttgaagttgatgatataaggatagatgaatatatttta
tatagttcaaaggaaattaaaaaactatatataagagatttaaagcatctaccaattgta
aagcgtaaagatgaaattaaccgatattttaaacaaaaattgaaagataaacttgaaaat
gtacaaaatcaaattgaggctaactatagttttaagataaaggatattaaggctaaagaa
aatttaaatgatgaagaaaaaagaaaaataattatagagctttatgatgaacgggataaa
tttatcaaggaattaaaacaaaaaggaaataaagctttaaaagatttttttaatagttgg
cagaatgaagaattgatttctacttattataatctatattcaaatgaagagatttttaat
gagattactgataaaaaaattccttcaaagcttgtaaaatatatagttaatagttctgaa
aaaaatattagagacaaaattattgacagtgaagatttaccacatatagtttatttaaaa
atggccttagagggtgtagatagtaaatatatacatgtaattgtagatgaagctcaagat
tatagttactttgaaatgcttatattgaagctattatcgaaacaaaactctttgactata
gtaggagatttaggacaaggaatttatagtcataaaggtattgactcgtgggaaaagctt
atagcaactgtatttgaagatgatgcaacctatgtttcgctaacacaaagttatagatct
acagtggaaattatagattttgctaatatagtgctagataaacaaagattaaatctaatt
cctgcaaaaccagttttaagacatggggataaacctaaaattacaaaaattgaaaatact
ttagatggaataaatgaaatagataagattgtagaagaagttgaaaacataaataaaaaa
actgttgcaattatatgtaagacttataagcaatgtgtagatgttttaaaagggttaaaa
gtgcaaagtaactatcagtggagtatagttgatgagaatgatagcagtattaaagggaat
aggataataattcctagttatatgacaaaggggttagagtttgatgctacgatagtttat
aattgtgatgaagaaaattatggcgagaataatcttgataaaaaattactctatgtcaat
ttaacaagagcattacatagagaatatataatgtataaaaaaagtctatcaaaattgttg
taa
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