Clostridium argentinense: RSJ17_12460
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Entry
RSJ17_12460 CDS
T05123
Name
(GenBank) hypothetical protein
KO
K02652
type IV pilus assembly protein PilB
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
carg02044
]
RSJ17_12460
02035 Bacterial motility proteins [BR:
carg02035
]
RSJ17_12460
Secretion system [BR:
carg02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RSJ17_12460
Bacterial motility proteins [BR:
carg02035
]
Pilus system
Pilus assembly proteins
RSJ17_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
nSTAND3
AAA_30
AAA_11
AAA_16
AAA_7
AAA_29
AAA_14
ResIII
Microtub_bd
cobW
ABC_tran
DEAD
TrwB_AAD_bind
Kinesin
FtsK_SpoIIIE
AAA_5
Rad17
AAA_19
AAA_18
SRP54
Sigma54_activat
AAA
Vps39_1
AAA_23
AAA_25
ATPase_2
Zeta_toxin
NPHP3_N
SLFN-g3_helicase
FeoB_N
DUF7351
DUF6242
TsaE
GGA_N-GAT
Motif
Other DBs
NCBI-ProteinID:
ARC85252
LinkDB
All DBs
Position
complement(2603267..2604745)
Genome browser
AA seq
492 aa
AA seq
DB search
MEECFLDLKNINIDIDLINILPKEFALKYKLIPYKLEKDTLYIASSEELHPSIIEELRFI
TFKNIKQSIADMEGILNLINYYYDKEKAQKTLKMLKRNNVIKLTSKEEDAPAVVILDSII
KEAINKKASDIHLEPFKNKVVVRIRINGDLIKIEEFPMEIYENITYRIKIISNMDISQKL
LPQDGKISFTTNHINYDLRVSSLPTINGEKFVIRILYKNDEIYNLNSLGFNEEDNKMLKK
ILKSSNGMILLTGPTGSGKTTTLYSMLLEINRDNNNVVTVENPVEYEVEKVNQVNINNNS
GLTFSKSLRTILRQDPDIIMVGEIIDEETAHIAITSSLTGHLILSTLHCNDTASSIIRLV
DMKIPKYLVVDSLVAVISQRLVRKICSNCKTAYNPTIEEREDLNLEKQDKLFKGIGCEKC
NHTGYMERQMVYEMIVITEEHKRLIIKFNDVNELRKYSFNGDNKCLKEKLKALVIEGITT
YEEYIANLQVVI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtgttttttagatttaaaaaatataaatattgatattgatttgattaatatc
cttcctaaagaatttgctttaaagtataaattgattccttataagttagagaaagataca
ctttatatagcttctagtgaagaattacacccgtcaataatagaagaattgagattcatt
acttttaaaaacataaaacaaagtatagcagatatggaaggtatattaaatttaatcaac
tattattatgataaagaaaaagcacaaaaaacattaaaaatgcttaaaagaaataatgtt
attaaacttacaagcaaagaggaagatgctccagcagtagttatattagattccataata
aaagaggctataaataaaaaagctagtgatatacatctagaaccttttaaaaacaaagta
gtagtgagaataagaatcaatggagacttaataaaaatagaagaatttcctatggagata
tatgaaaatattacttatagaataaaaattatttctaatatggatataagtcaaaagctg
ttaccacaggatggaaaaataagctttactacaaatcatattaattatgatttgagagta
tcttcattacctacaataaatggagaaaagtttgtaattagaatactgtataaaaatgat
gaaatatataatcttaatagtttggggtttaatgaagaagataataaaatgctaaaaaaa
atattaaaatccagtaatggaatgatattgttaacaggccctactggcagtgggaaaaca
actactttgtattctatgttattagagataaatagggataataataatgtagtaactgtt
gaaaatcctgtagagtacgaagttgagaaagtaaatcaagtaaacattaataataattca
ggattaacttttagtaaatctctaaggactatactccgtcaggacccagatatcatcatg
gtaggagaaataattgatgaagaaacagcacacattgcaataacatcttctcttacaggt
catttaattttatctacgctacattgcaatgacactgctagttctattattagattagta
gatatgaagatacctaagtatttagtcgtagattctttagtagcagtaatctctcaaaga
ttggttagaaaaatatgtagtaattgtaagactgcctataatccaactatagaggaaaga
gaagatttaaatttagaaaagcaagataaacttttcaaaggtataggttgtgaaaaatgt
aatcatacaggatacatggaaagacagatggtatatgaaatgatagttattacagaagaa
cataaaagattaataattaagtttaatgatgttaatgaacttaggaagtatagttttaac
ggagataataaatgtttaaaagaaaagcttaaagctttggtcatagagggaataactaca
tatgaagaatatatagctaatttacaagtagttatctaa
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