Clostridium argentinense: RSJ17_14220
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Entry
RSJ17_14220 CDS
T05123
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
carg
Clostridium argentinense
Pathway
carg00550
Peptidoglycan biosynthesis
carg01100
Metabolic pathways
carg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSJ17_14220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSJ17_14220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
carg01011
]
RSJ17_14220
Enzymes [BR:
carg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSJ17_14220
Peptidoglycan biosynthesis and degradation proteins [BR:
carg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSJ17_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Nucleoside_tran
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
ARC85577
LinkDB
All DBs
Position
complement(2992652..2995585)
Genome browser
AA seq
977 aa
AA seq
DB search
MVKNNKKEKKISRYTVFFITMAVIFTILIVRLLFLQVVMVEEYREEASKKHYKNVSKVAP
RGDIIDRKGEVLATSKQSYALMFTETPESKEVFFDTMEKVFKILDENKISIVDEFPITVE
PKFEFKFNAVDEASKQWMELRFKKDRGFQEDIINKLYKGKSESDLSKAELQKVDEELLKI
TAEEAFNKLFNEYKEQFKKNYEIDIDKKNYSLTDKRRYIIVLDSIKIQSYSGYKPVVISN
SLDKEAAFIFEQLQPDLPGIMVETQPIRNYPNGELGSAFLGYTAKIDSWEKEKFEEKGYD
VSADKVGKVGLEFSFESILKGTKGQESIEVNKQGRKVKTLGEVEAYPGKTLQLNIDKNIQ
SVAERALDDTMADLQKQGRRNDVDTTNATRGAAIVMEAKTGKILALASRPGYDPNIFTLT
PELSSKYFNSDLEKMGKEYIEKRGLTSISGILDENELSSLSYEQKVDKLLNRMFPLDTTI
ENNTKSRQDSYDIFPKPLYNYATLSLIPPGSVFKPLTGLAGLEEGVIDLSTTINDAGEYN
KRYSDYKGACWIYNQSGGSHGSIDIREALKVSCNYFFYEVADRLFAKGGEKSSGLDYIAK
YAWKFGLGVEPNSNKEPKTGIEIPENFGQVYNYESSKNKFANEYVEQIANYLNIGIDSIN
TTPHYKPIDIRRKNEVGSDKEKSEIAKINEKKTILIDAIKEEMKKDVKGKEEEIVPKMEK
LLKDLIESVPEFKEKKYTDKDIKNMAIAINYAIADAISNKKSAANAYDASIGQGMNQFTP
LQLTNYMATLVNGGYRYEMQLVDKIIDPVTGEETVIKPQLLDKFDINPEYLEAIKQGMGD
VVSATEGTGATAFTNYPLKHGGKTGSSTFNQNQEEALGRTSYAVFLGFAPFDDPEIVTCV
IIFDGGHGGYAGPVVRAIYEEYFKEELLKVDPGYQFMYPETQNNSNKNNTTDNKPTNNNE
NTENNNQEDTLDQNNNQ
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaacaataaaaaagaaaaaaaaatttcaagatatacggtgttttttattact
atggctgtgatatttacaattttgatagtaagactcctatttcttcaagtagttatggta
gaagaatatagggaagaagcaagtaaaaagcactataaaaatgtttctaaggtagcacca
agaggtgatatcattgatagaaagggagaagtattagcaacaagcaaacaaagttacgca
ttgatgtttacagaaactcctgagagtaaagaagttttttttgatactatggaaaaggtg
tttaaaattttagatgaaaataagatttctatagtagatgaatttcccataactgttgag
ccgaaatttgaatttaaatttaatgctgttgatgaagcaagtaaacaatggatggaactt
agatttaaaaaagatagaggatttcaagaggatataatcaataaactttataagggaaaa
agcgaaagtgatctttctaaggcggaattacagaaagtagatgaagaattattaaagatt
actgcagaagaagctttcaataagctctttaatgaatataaagaacaatttaagaaaaat
tatgagattgatattgacaagaaaaattatagcttaactgataagagaagatacattatt
gtgttagatagcattaagatacaaagttattcaggatataaacctgtggttatatctaac
agtttagataaagaagctgcgtttatctttgaacaacttcagccagacttgccaggtata
atggtagaaactcaacctattagaaattatcctaatggtgaactaggttcagctttttta
ggatatactgcaaaaatagactcttgggaaaaagaaaaatttgaagaaaagggatatgat
gtaagtgctgataaagtaggaaaagtaggtttagagtttagctttgaaagtattctaaaa
ggaactaaaggtcaagagagtatagaagtaaataagcagggaagaaaagttaaaactctt
ggagaagttgaagcttatccaggaaagactttacagcttaatattgataaaaatatacaa
tcagttgcggaaagagcattggatgacactatggctgaccttcaaaaacaaggcaggaga
aatgatgttgatactaccaatgctacaagaggagcagccatagttatggaagctaagact
ggtaaaatacttgcattagcaagtaggccaggatatgaccctaatatatttacacttacg
ccagaactttcatcaaaatattttaattctgatttagaaaagatgggaaaagaatatatt
gaaaaaagaggacttacctctatatcagggatattagatgagaatgaattgtctagtctt
tcttacgaacaaaaggtagataaattacttaatagaatgtttccgttagatactacaata
gaaaataatacaaagtctagacaagacagctatgatatatttcctaagccattgtataac
tatgctacattatctttaattccaccagggtctgtatttaaaccattaacaggattagct
ggacttgaagaaggcgttatagatttatcgactacaattaatgatgctggagaatacaac
aaaagatactcagattataagggagcatgttggatatataaccaaagtggaggttctcat
ggtagtatagatattagagaggctcttaaagtatcttgtaactatttcttctatgaggta
gcagatagattgtttgcaaaaggcggagagaaatcaagtggacttgattatatagcgaaa
tatgcatggaagtttggactaggggtagagcctaattctaataaagagcctaaaactggt
atagaaataccagaaaactttggtcaagtttataactatgaatcaagcaaaaataagttt
gctaacgaatatgtagaacaaatagctaattatttaaatataggtatagattctataaac
actacaccacattataaacctattgatataagaagaaaaaatgaagttggtagtgataaa
gaaaaaagtgaaatagctaaaatcaatgagaagaaaactatattgattgatgctattaaa
gaagagatgaaaaaagatgttaaaggaaaagaagaagaaatagttcctaaaatggaaaaa
cttcttaaagatttaattgagtctgttccagaatttaaagaaaagaaatataccgataaa
gatattaagaatatggcaatagcaattaattatgccatagcagatgctatatctaataaa
aaatctgctgctaatgcttatgatgcttccataggacagggaatgaaccaatttactcct
ctacaattaacaaactatatggctactttagttaatggtggatatagatatgaaatgcag
cttgtggataaaattattgatccagtaacaggagaagagactgtaattaaacctcaactg
ttagataaatttgacattaatccagagtatttagaagctataaagcaagggatgggggat
gttgttagcgcaacagaaggtacaggtgctactgcatttacaaattatccattaaaacac
ggtggtaaaacaggttcttctacttttaatcaaaatcaagaggaggcattaggaagaact
tcttatgccgtatttttaggttttgcacctttcgatgatccagaaatagtaacttgtgtt
attatatttgatggagggcatggaggatatgcaggaccagtagtaagagccatatatgaa
gagtactttaaagaagaattattgaaagtagatccaggctatcagtttatgtatcctgaa
acacaaaataattctaataaaaataacacaacagataacaaacccacaaataataatgaa
aatacagagaataataatcaagaagatactttagatcaaaataataatcaataa
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