Clostridium argentinense: RSJ17_16980
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Entry
RSJ17_16980 CDS
T05123
Name
(GenBank) alveolysin
KO
K11031
thiol-activated cytolysin
Organism
carg
Clostridium argentinense
Pathway
carg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSJ17_16980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
carg02042
]
RSJ17_16980
Bacterial toxins [BR:
carg02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
RSJ17_16980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Thiol_cytolys_C
PM2_P3
Motif
Other DBs
NCBI-ProteinID:
ARC86064
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Position
3567837..3569366
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AA seq
509 aa
AA seq
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MRLKKHFKTQKLLVCLFLNLCVISYPFVTFGKTLTVNSPVTTNNSSAIDSGIANLNYDRN
AILAVNGDNIESFVPKEGFESKGKFIVVERNKKSLTTSPVDISIIDSVTDRTFPGALQLA
NDAFVENRPNILMCKRKLLNISIDLPGMKNENTIAVQNPTYGNVSGAIDALVSTWNEKYS
ATHTLPARTQYSESMVYSKNQISSALNVNYKVLDNSLGVDFNAISSGEKKVMIAAYKQIF
YTVSAELPNNPSDLFDDSVTFEELTRKGVSNEAPPVMVSNVAYGRTIYVKLETSSKNKDV
QAAFKALLNGVNVESNQQYKDIFEESSFTVVVLGGDAQEHNKIITKDFDEIRNVIKSNAE
FSTKNPAYPISYTSIFLKDNSVAAVHNKTDYIETTSTEYSKGKIILDHSGAYVAQFEVSW
DEFSYDENGNEILNHKTWDGNYKDKTAHYSTVIPLPANSKNIRILARECTGLAWEWWRTI
INEYNVPLTNEIKVSIWGTTLYPYTSISH
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaggctaaaaaaacattttaaaacacaaaaattattagtatgcttatttcttaattta
tgtgttatttcctatccatttgttacctttggtaaaacacttacagttaactcacccgtt
acaacaaacaattcaagtgctatcgattctggtatagcaaacttaaattatgaccgaaat
gcaattctagcagtaaatggtgataatatagaaagctttgttccaaaagaaggttttgaa
tcaaaaggaaaatttatagtagttgaacgtaataaaaaatcacttacaacatcaccagta
gatatttcaattatcgattctgtaactgatcgcacattcccaggagcattacaacttgca
aatgatgcttttgttgaaaatcgacctaatatattaatgtgcaaaaggaagcttttaaac
atctctatagatttaccaggcatgaaaaatgaaaacacaatagcagttcaaaatccaaca
tatggtaatgtatctggagcaatagatgcattagtatctacttggaatgaaaaatactca
gcaacacatactttgcctgcaagaacacagtattcagaatctatggtttatagtaaaaat
caaatatcaagtgctttaaatgttaattataaagttcttgataattcacttggagtagat
tttaatgctatatctagtggagaaaaaaaagtaatgattgctgcatataaacaaatattt
tacactgtaagtgcagaacttcctaataatccatctgatctttttgatgatagtgttact
tttgaagaattaactcgtaaaggagtaagtaatgaagctccaccagttatggtatcaaat
gtagcctacggtagaacaatttatgtaaaattagaaacatcatctaagaataaagatgta
caagctgcctttaaggcactacttaatggtgttaatgtagaaagcaatcagcaatataaa
gatatttttgaggaaagttcatttactgttgtagtattaggtggtgatgcacaagagcat
aacaaaattatcacaaaagattttgatgaaataagaaatgtaattaaaagcaatgctgaa
tttagcactaaaaatcctgcataccctatttcatatacaagtattttcttaaaagataat
tcagttgctgctgttcataataaaacagattatattgaaactacatctacagaatattct
aaaggtaaaataattcttgaccatagtggtgcatatgttgctcaatttgaagtatcatgg
gatgagttttcatatgatgagaatggaaatgaaatattaaatcataaaacatgggatgga
aactataaagacaaaacagctcattactctacagtaataccacttccagctaactcaaaa
aatataagaattttggcaagagagtgtacaggccttgcatgggaatggtggagaacaatt
attaatgaatataatgttccattaacaaatgaaataaaagtttcaatttggggaactaca
ttatatccatatactagtattagtcattaa
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