Clostridium argentinense: RSJ17_16990
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Entry
RSJ17_16990 CDS
T05123
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carg03000
]
RSJ17_16990
Transcription factors [BR:
carg03000
]
Prokaryotic type
Helix-turn-helix
Other families
RSJ17_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
PAS_8
AAA
AAA_2
HTH_50
HTH_29
PAS
MCM
PAS_9
HTH_17
AAA_7
Diguanyl_cycl_sensor
HTH_11
HTH_22
HTH_23
HTH_7
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ARC86066
LinkDB
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Position
complement(3570916..3572856)
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AA seq
646 aa
AA seq
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MNDYMNFVTKAWNEFVKHNKVNKEIKKDIRDSWIRCKEYNVDYMDGRGIEEYKVPVEIKL
RENVELVSVAHSIMENLYNTISGSGFALFLSDKDGYILDVIGDESILEKAEELRFIKGAL
WSEKVVGTNAIGTCLYLDKPIQTIGAEHYGIEQHSWTCSSAPIHDSDGKILGCINMSGIC
KDAHLHTLGIVIAAAESIKKQLELILSYNLLNITFDSIVEGMIVIDENFNIKKVNHRAEN
ILGIDRNEIFKIDIKKALGNLNFNYIIENYDESYNNIECDFHIKNRRIKCILNVVPMSVN
NKFMGVVITFRESKFVHKFVNKVVGYNATYTFKDIVTSNEKMINMINFAKKASKSDCNIL
IEGSSGTGKELIAQAIHNYSERNNGPFVAVNCASIPRELMESELFGYDKGAFTGAAKEGH
PGKFELADGGTIFLDELGELPLDMQSKLLRVLDNNTIVRVGGNYEKKLDVRIIGATNKEL
REEINRKTFREDLYYRLNVMNIKTIPLKERKEDIEILSEYFVNNLNIKNMDKCKLIKKDY
INQLKKHDWPGNIRELRNVIERDYYSSENDMIYMQYSENDSIVENNFNNEESKELDKILP
IDILEKESIIKAINLCEGNIVKSAEMLGISRATIYRKIKKYNIKNM
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattatatgaattttgttacaaaagcttggaatgaatttgtaaaacataataag
gttaataaagaaattaaaaaggatataagagattcatggataaggtgcaaagaatataat
gtagactatatggatggaagaggtattgaggaatataaagttcctgtagaaattaaatta
agagagaatgtggagttagtttcagtggcacattctataatggagaatttatataacaca
atatcaggctcaggctttgcactatttctttcagataaagatggatatatattagatgtt
attggcgatgagagcattttagagaaagctgaggaattaaggtttataaagggagcattg
tggtcggaaaaagtagtaggaactaatgctataggaacctgtttatatttagataaacca
atacaaactataggtgctgaacattatggaatagaacaacattcttggacatgctcttca
gcacctattcatgatagtgacggcaaaatattaggatgcattaatatgtctggtatatgc
aaagatgctcatctgcatactttaggaatagttattgcagcagctgaatctataaagaaa
caattagaacttatattatcctataacttattaaatataacttttgattccattgtggaa
ggtatgatagttatagatgaaaattttaatattaagaaagtaaatcatagagcggaaaat
atattaggtatagatagaaatgaaatatttaaaatagatataaagaaagccttgggaaat
ttaaattttaattacattatagaaaactatgatgagtcttacaataatatagaatgtgat
tttcatattaaaaatagaagaataaagtgcatattgaatgtagtaccaatgagtgttaat
aataagtttatgggagtagttataacttttagggaaagtaaatttgtacataagtttgta
aataaagtagtaggttataatgcaacttatacatttaaagatattgtaactagtaacgag
aaaatgataaacatgataaattttgcaaagaaagcttcaaaaagtgattgtaatatatta
atagaagggtctagtggtactggaaaagagttgatagctcaagctatacataattacagt
gaaagaaataatggtccttttgtagctgtaaattgtgcttcaatacctagagagttaatg
gaaagtgaactttttggatatgataaaggtgcttttactggagctgctaaagaagggcat
ccaggaaagtttgaattagctgatgggggaactatttttttagatgaattaggagaactt
ccactagatatgcaatctaagctattaagagttttagataacaatacaattgttagagtt
ggcggaaattatgaaaagaaattagatgtgagaataataggagcaaccaataaagaatta
agagaagaaataaatagaaaaacctttagagaagatttatattataggttaaatgtaatg
aacataaaaacaatccccttaaaagaaagaaaagaagatatagaaatactatcagaatat
tttgttaataatcttaatataaaaaatatggataaatgtaagcttataaaaaaagattat
ataaatcaattaaaaaagcatgattggcctggtaatataagagaacttaggaatgtaata
gagagggattattactctagtgaaaatgatatgatttatatgcagtattcagaaaatgat
tcaatagtagaaaataattttaataatgaagaatcaaaggagttagataagatacttcct
atagatattttagaaaaagaaagtataataaaagctattaatctttgtgaaggtaatata
gtaaaatctgcagaaatgttaggaataagtagggctactatttatagaaagataaagaaa
tataatataaaaaatatgtag
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