Clostridium argentinense: RSJ17_17930
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Entry
RSJ17_17930 CDS
T05123
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carg03009
]
RSJ17_17930
Enzymes [BR:
carg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RSJ17_17930
Ribosome biogenesis [BR:
carg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSJ17_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
PrmA
Methyltransf_15
MTS
TRM5-TYW2_MTfase
Methyltransf_11
UPF0020
N6_N4_Mtase
Methyltransf_12
PCMT
Methyltransf_4
FtsJ
TPMT
RrnaAD
Ubie_methyltran
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ARC86234
LinkDB
All DBs
Position
complement(3780716..3782107)
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AA seq
463 aa
AA seq
DB search
MANLKSYNTAVEKNKEYILQIESNGHQGEGVGKIDNFTIFIEGALKGEVVKIKVIKVNKN
YGIGKLLEVISPSEERENPICSIYKRCGGCNLQHTGYEAQLNFKTERVEEVIKRIGKLEN
IKVHKTLGMKNPYNYRNKVQLPVGRSKDGEVVVGFYASRSHDIINMEKCHIQDEVADKVV
ELTKRWIEKYNIETYNEENHSGLVRHIMIRKGFKTGEIMIVVVTNGQKLPHSNEFVELMT
ENIEGVASIIQNINKNKTNVILGEKSKTLYGKDTITDFIGEFKFNISPLSFFQVNSIQTE
VLYEKALEYADLTGDETVFDAYCGTGTISLFLSQRAKKVYGVEIVPEAIENAIENAKTNR
VTNAEFIVGEAEKEIPKLIDSGIKADVVVVDPPRKGCEESLLHAIAKMSPQKIVYVSCDP
ATLARDLRILSDLGYKTLEVQPVDMFPQTAHVESVALMSKVEK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttaaaaagttataatacagcagtagaaaaaaacaaagaatatatacttcaa
atagaaagtaatggacaccaaggtgaaggtgtaggtaaaatagataattttactatattt
atagaaggggcacttaaaggagaagtagttaaaataaaagtaattaaagttaacaaaaac
tatggaataggtaagctcttagaagtaatatctccttcagaagaaagagagaaccctatt
tgctctatttacaaaagatgtggtggatgcaatcttcaacatacgggctatgaagctcag
ttaaattttaaaactgaaagagtagaagaagttataaaaagaataggaaagcttgaaaat
attaaagtacataaaactttaggtatgaaaaatccatataactatagaaataaagtacaa
cttcctgtaggaagaagtaaagatggcgaagtggttgttggattctatgcatcaagaagc
catgacataataaatatggaaaaatgccatatacaagatgaagtagcagataaggtagta
gaattaactaaaagatggatagaaaaatacaatatagaaacttataatgaagaaaatcat
agcggactcgtaagacatataatgatcagaaaaggttttaaaaccggagagataatgata
gttgtggtaactaatgggcaaaagttaccgcatagtaatgaatttgtagagcttatgaca
gaaaatatagagggagtagcttctataattcaaaatataaataaaaataaaaccaatgtc
atattaggggaaaagtcaaaaacactatatggaaaagatactataacagattttataggt
gaatttaaatttaacatatctccactatctttctttcaagtaaactcaatacaaacagaa
gtgttatatgaaaaagctctagaatatgcagatcttacaggcgacgaaacagtcttcgat
gcttactgtggaacaggaacaatatccttattcctttctcaaagagctaaaaaagtttat
ggcgtagagatagtacctgaagcaatagaaaatgcaatagaaaatgccaagacaaataga
gtaaccaatgcagaattcatagttggagaagcagaaaaggaaataccaaaactaatagac
agtggcatcaaagcagacgtagtagtagtagacccaccaagaaaaggctgcgaagaatca
ctactccacgcaatagctaaaatgtccccacaaaaaatagtctacgtatcctgtgaccca
gcaactcttgcaagagatttaagaatattaagtgacttaggttataaaactttagaagtg
cagccggtggatatgtttcctcaaacggctcacgttgagagtgttgccttgatgtcaaag
gttgagaaatag
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