Clostridium argentinense: RSJ17_19705
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Entry
RSJ17_19705 CDS
T05123
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
carg
Clostridium argentinense
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carg03009
]
RSJ17_19705
Enzymes [BR:
carg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RSJ17_19705
Ribosome biogenesis [BR:
carg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RSJ17_19705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiN
S4_2
Motif
Other DBs
NCBI-ProteinID:
ARC87106
LinkDB
All DBs
Position
complement(4199464..4200180)
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AA seq
238 aa
AA seq
DB search
MERLDKVLANLGHGSRKEVKALCKKGEVLVNGEEVKDSAIKINPEVDVIEVKGEVLNYRE
FIYIMMNKPDGVVSATFDNYDETVIDILEPEYQVFKPFPIGRLDKDTVGLLLITNDGELN
HKLISPKSHVDKVYYAEIDKAVTEEDVKAFEDRITLDDGYQCMPAKLEILEASEHGSEVL
VTIQEGKFHQVKRMFEAVGKSVVYLRRISFGPLKIDEKLEEGTYRELTEEEIEMLKNV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattagataaagttttagcaaatttaggtcatggaagtaggaaagaggttaag
gcactatgcaaaaaaggagaagttttagttaatggtgaagaagttaaagatagtgctata
aaaattaaccctgaagttgatgttattgaggttaaaggggaagttttaaactatagagaa
tttatatatataatgatgaataaacctgatggagtggtaagtgctacctttgacaattat
gatgaaacagtaatagatattttagaaccagaatatcaagtgtttaaaccatttcctata
ggaagactagacaaagacacagtaggattacttttaataactaatgatggagagttgaac
cataaattaatatctcctaaaagtcatgtagataaggtttattatgcagaaatagataaa
gcagttacagaggaagatgttaaagctttcgaagataggattacattagatgatggatat
cagtgtatgcctgctaaactagaaatacttgaagcgagcgagcatggttcagaagtttta
gttacaattcaagaaggtaaatttcatcaagttaaaagaatgtttgaagcagtaggaaaa
tctgtagtttatttaagaaggataagctttggcccactaaaaatagatgaaaaattagaa
gaaggcacatatagagagctaactgaagaagaaatagaaatgcttaaaaatgtgtag
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