Clostridium argentinense: RSJ17_19800
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Entry
RSJ17_19800 CDS
T05123
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
carg
Clostridium argentinense
Pathway
carg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSJ17_19800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_19800
Enzymes [BR:
carg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RSJ17_19800
DNA repair and recombination proteins [BR:
carg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSJ17_19800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
AlkA_N
Prp19
Motif
Other DBs
NCBI-ProteinID:
ARC86570
LinkDB
All DBs
Position
complement(4225974..4226855)
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AA seq
293 aa
AA seq
DB search
MDFKEILEFEDRIVLKGVKNFELPHIFECGQCFRWSRLENDNYIMVAYRKVIELEKNNDE
VIIYNTTKEDFDNIWCDYFDLKRDYTSIKEELSKDPLLEKSVEFGHGIRLLQQEPFEIVL
SFITSANNRIPMIKRAIENISKKFGDELHYKGKTYYAFPTPAQLINASPEEIESLGVGFR
AKYITDAINKVYNNVYNLEEIKALNDDECHEALKQFNGIGPKVSDCIMLFSMEKYSAFPV
DVWVKRAMQFFYLAPDVSLPKIRIFARDKFGELSGFAQQYLFYYARENNIKIE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagaaattttagaatttgaagatagaattgtattaaagggagttaaaaac
tttgaattacctcatatttttgaatgcggacaatgctttagatggagtaggttagaaaat
gacaattatattatggtagcttatagaaaagttatagagttagaaaaaaataatgatgag
gtaataatttataatacaactaaagaagactttgataacatatggtgcgactattttgat
ttaaaaagagattatacttctattaaagaagaattaagtaaggatccattacttgaaaaa
tctgtagaatttggacatggaattagattacttcagcaagaaccttttgaaatagtacta
tcttttataacttctgcaaataatagaatcccgatgataaaaagagcaatagaaaatata
agtaagaaatttggagatgagcttcattacaaaggtaaaacatattatgctttccctact
ccagcgcaacttataaatgcttcaccagaggaaattgaaagcttaggagttggatttaga
gcaaaatacataactgatgctataaacaaagtttataataatgtttataacttggaagaa
ataaaagcattaaatgatgatgaatgtcatgaagcattaaaacaatttaatggtataggc
cctaaagtttcagactgtataatgcttttctcaatggagaaatattctgctttcccggtg
gatgtatgggtaaaaagagcaatgcaatttttctatttagcaccagatgtatctttacct
aagataagaatatttgctcgtgataaatttggagagttatcaggttttgcacaacaatat
ctattctactatgctagagagaataacataaaaattgagtag
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