Chryseobacterium arthrosphaerae: EGY05_02820
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Entry
EGY05_02820 CDS
T05746
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
carh
Chryseobacterium arthrosphaerae
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carh03032
]
EGY05_02820
03036 Chromosome and associated proteins [BR:
carh03036
]
EGY05_02820
03400 DNA repair and recombination proteins [BR:
carh03400
]
EGY05_02820
DNA replication proteins [BR:
carh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGY05_02820
Chromosome and associated proteins [BR:
carh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EGY05_02820
DNA repair and recombination proteins [BR:
carh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EGY05_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
COMMD9_HN
DUF4777
DUF937
Motif
Other DBs
NCBI-ProteinID:
AYZ10934
LinkDB
All DBs
Position
complement(583676..583966)
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AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataagttgggaacagaaaagaatgaa
acacagaaagttgtagaagcttttatgcaggagatcagaacttctatgtataatggggat
aacgtttatctgagaggttttggatcttttatcattaaaacaagagctgctaaaacagga
agaaatatttctaagaatactgcaattgagattcctgctcataacattcctgctttcaaa
ccttcaaagtcttttgtagagaaagtaaaaactaaagttgcagtaaaataa
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