Chryseobacterium arthrosphaerae: EGY05_04025
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Entry
EGY05_04025 CDS
T05746
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGY05_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carh03019
]
EGY05_04025
03016 Transfer RNA biogenesis [BR:
carh03016
]
EGY05_04025
Enzymes [BR:
carh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EGY05_04025
Messenger RNA biogenesis [BR:
carh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EGY05_04025
Transfer RNA biogenesis [BR:
carh03016
]
Prokaryotic type
tRNA degradation factors
EGY05_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
KH-I_KHDC4-BBP
PCB_OB
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
AYZ11139
UniProt:
A0A1B8ZN30
LinkDB
All DBs
Position
863293..865533
Genome browser
AA seq
746 aa
AA seq
DB search
MSIPQAFTETIILADGREITIETGKLAKQADGSVVVKCGGTMLLATVVANKEANPGVDFL
PLTVDYREKFYAGGRIPGNFFRREAKPSDDEVLTMRLVDRVLRPLFPEDFHAEVQVMISL
ISYDKEVMPEALAGLAASAAIAITDIPFNGPMSEARVVRIDGQLAVNPSYENLLKSDIDI
MVGATKDSIVMVEGEMKEISEQEMLEAINFAHAEIKKQIEAQERLAEKVGKSFPKREYSH
EEHDEEIREKVWKECYDKVYEVAKTPSNKEERGDKFKAIREEFLAQYAENEEELERVTPF
VKVYYHDVEKEAMRQMILEDNIRLDGRDPQTIRPIWSEIDYLPGAHGSAIFTRGETQSLT
AVTLGSVKDANMIDSVITQHDERFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALT
AVIPAENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLITDTKS
GKFTVLSDILGDEDHLGDMDFKVTGTEDGITACQMDIKIQGLSMDIMEKALMQAKDGRLH
ILNKITETISTPRADVKPHAPKMVVMEIAKDFIGAVIGPGGKIIQQLQKDTETVIAIEEI
GEIGRIEIAGTDREKINAAIAKINEITFVPVVGEVYKGKVVKVMDFGAFVAIAKGTEGLL
HISEIEWARLDKVPYAEGDEVEVKFMGYDDRKKMKLSRKVLLPRPPRPEGKPKSEGQGRP
DGQRRPEGQKPQGERPVEKQEPSSEA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacctcaagcgtttacagaaacgattatccttgcagacggcagggaaatcact
attgaaacgggaaagctggccaagcaggctgacggatctgtagtggtgaagtgtggcgga
acaatgcttttagcaactgttgtagccaacaaagaagcaaatcctggtgtagacttttta
ccattaacggtagattacagagaaaagttttatgcaggtggaagaattcctgggaatttc
ttccgtagagaagcaaaaccttctgatgatgaagttcttacaatgagattggtggacaga
gtattacgtccgcttttccctgaagatttccacgcagaagtacaggtgatgatctcattg
atctcttatgataaagaagtaatgcctgaagcactggcaggtctggcagcttctgcagca
attgctattacagatattcctttcaacgggccaatgtctgaagcaagagtcgtaagaatt
gacggtcaattggcagtgaacccaagctacgaaaatttattaaaatcagatatcgacatt
atggtgggagctaccaaagactccatcgtaatggtagaaggagaaatgaaggagatctct
gagcaggaaatgcttgaagcgatcaacttcgctcatgctgagatcaaaaaacagatcgaa
gctcaggaaagattagctgaaaaagtaggaaaatctttccctaaaagagaatacagccac
gaagagcacgatgaagaaattcgtgaaaaagtatggaaagagtgctatgacaaagtatat
gaagtagcaaaaactccatccaacaaagaagaaagaggagataaattcaaagcaattcgt
gaagagttcctggcgcagtacgcagaaaacgaagaagagctggaaagagtaactcctttc
gttaaagtatattaccatgacgtagagaaagaagcgatgcgtcagatgatccttgaagac
aatatccgtcttgacggtcgtgatcctcagacgatccgtccgatctggtcagaaatcgat
taccttccgggagctcacggttctgcgatctttacaagaggggaaacgcagtctcttaca
gcagtaactttaggttctgtgaaagatgccaacatgatcgacagcgttattacgcagcac
gacgagagattcttcctacactataacttccctccgttctctacaggtgaagcaagacct
ttaagaggaacttcaagaagagaagtaggacacggaaacttggctcagagagctttaaca
gcagttattcctgcagaaaatccatacacgatcagaatcgtttctgacatccttgaatct
aacggttcctcttcaatggcaactgtttgtgcaggtacactggcactaatggatgcggga
gttcagattacaaaaccggtttcaggtattgcaatgggactgatcactgatacaaaatca
ggtaaatttaccgtactttctgatatcttgggagatgaagatcaccttggtgatatggac
ttcaaagttacaggtactgaagacggtatcactgcttgtcagatggatatcaaaatccag
ggactttctatggacatcatggagaaagctttgatgcaggctaaagacggaagattacac
atcctgaataaaatcactgaaacaatttctacaccaagagctgacgtgaagcctcatgct
ccgaagatggtagtaatggagatcgctaaagacttcattggtgcagtaatcggacctggt
ggaaaaattatccagcagttacagaaagatactgaaacggttatcgctatcgaagagatt
ggagaaatcggacgtatcgaaattgcaggaacagacagagaaaagatcaacgctgctatt
gctaagatcaatgaaattactttcgtaccggttgtaggagaagtttacaaaggtaaagta
gtgaaagtgatggatttcggagcttttgttgctattgctaaaggaacagaaggtcttctt
cacatttctgaaattgaatgggcgcgtttagacaaagttccttatgctgaaggtgatgaa
gtagaagtgaaatttatgggttacgacgaccgtaagaaaatgaagctttcccgtaaagtt
cttttaccaagacctccaagacctgaaggaaaaccaaaatctgaaggacagggaagacca
gacggacaaagaagaccggaagggcaaaaacctcaaggtgaaagacctgtagaaaaacag
gagccttcttctgaagcataa
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