Chryseobacterium arthrosphaerae: EGY05_05355
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Entry
EGY05_05355 CDS
T05746
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGY05_05355 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carh03019
]
EGY05_05355 (rny)
Messenger RNA biogenesis [BR:
carh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGY05_05355 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
EIF4E-T
KH_2
DUF5995
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AYZ11388
LinkDB
All DBs
Position
1167546..1169114
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AA seq
522 aa
AA seq
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MMIEVIVGVVCLVIGAAVGMFFSRSSLNTKAKFIIDDAKKNAENLIEKANVQAESIKKEK
NLQAKEKFLELKSQHDADIQSREKKMQEVEKRTKDKEHKLNDELSKIGKLEKDLDKQIAD
YSKKNEILEKKQQELDTATAKKVEILEKISNYTAEEAKAELVETMRAEAKTRAQAHVQSI
MEEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALEA
VTGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEEE
IIEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLNV
KLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEIEMKSLLSP
IIQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESGK
VNDEVASQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
attatgatagaagttatagtaggtgttgtttgtttggtaatcggggccgcagtgggaatg
tttttttccagaagctctctgaatactaaagcaaaattcatcatagatgatgccaagaaa
aatgccgaaaaccttatagaaaaagctaacgtacaggctgaatccataaagaaagaaaag
aaccttcaggctaaagaaaaattcctggaactgaaatcccagcatgatgcagacatccag
tcccgcgaaaagaaaatgcaggaggttgagaaaagaaccaaagacaaggagcacaagctg
aatgacgagcttagcaagataggaaagctggaaaaagatctggataaacagattgcagac
tattctaaaaagaatgaaatcctggaaaagaaacagcaggaactggatacggcaacggct
aaaaaagttgaaattcttgaaaaaatttcaaattatacagctgaagaagctaaagctgaa
ttggtagaaacaatgagagctgaagctaaaacaagagctcaggcacacgttcagagcatc
atggaagaagctcagatgaacgctaaaaatgaagcgagaaaaatcgttatccagacgatc
cagagaatcggaaccgagcaggctatcgaaaactcagtgtctgttttcaatattgaatct
gatgaggtaaaaggtagaatcatcggtagagaaggtagaaacatccgtgctttggaagct
gtaacaggagtagagatcatcgttgatgatactccggaagccattcttctttcatgcttc
gatccggtaagaagagagatcgcaagactatcccttcacagattggtaacggatggtaga
attcacccggcaagaattgaagaagtggttgagaaaaccagaaaacaaattgaagaagag
atcattgaagtaggaaagagaacgatcattgatttaggaatccacggattgcaccctgaa
ctgatcaagatcgtagggagaatgaaataccgttcatcttacggacaaaacttactgcag
cactcaagagaagttgccaatattgctgcaaccatggctgctgaattaggtcttaatgta
aaattggccaaaagagcaggtcttttacacgatatcggtaaagttcctgagcaggaatca
gaattaccacacgcattattaggaatgcagtgggctgagaaatacggtgagaacccggaa
gtggtcaacgctattggtgctcaccacgacgaaatcgaaatgaagtctctgttatctccg
atcattcaggtagccgatgctatttcaggagcaagaccgggagcaagaagacaggtattg
gaatcttatatccagagactgaaagatcttgaatctgccgcattaagcttcgacggggtg
tccagcgcttatgcaatccaggcaggtagagaactgagagtaatggtagaaagcggaaag
gtaaatgatgaagtagcttctcagttatcttacgacatttctgaaaagatccagaacgaa
ctgacgtatccgggacaggtaaaagtaacggtaatcagagaaacaagagccgtgaatatt
gccagataa
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