Chryseobacterium arthrosphaerae: EGY05_06190
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Entry
EGY05_06190 CDS
T05746
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh03420
Nucleotide excision repair
carh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGY05_06190
03430 Mismatch repair
EGY05_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carh03400
]
EGY05_06190
Enzymes [BR:
carh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGY05_06190
DNA repair and recombination proteins [BR:
carh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGY05_06190
MMR (mismatch excision repair)
Other MMR factors
EGY05_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_12
UvrD_C_2
AAA_30
UAE_UbL
RTP
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYZ11536
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All DBs
Position
1350698..1352563
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AA seq
621 aa
AA seq
DB search
MNSLFFRDLELIKRDERQYTAYRSMANSVIIAGPGSGKTRVLTLKAVTLAKSHIHKPCGL
ACISYSRESVRELKKRFKSYGYVPTHKDFIGTVHSFSLLHVIQPFAHLYPQYNVTYPIKI
LPDEVKTGLYNSVLHELKIEDGRTLTLTDINKHRSLSIRGRSEVNMESSPLVAKGAELFE
KKLSETEFIDFVSIINLSAKIINEQDYVRETLRSQFPWLLVDEYQDLGKALHEMVLELVF
NADIKLYAVGDTNQSIYGFNGGYPDFLEELTTNDNIKTIELISNYRSSQHIINASREALQ
PTPPYPEYVSGNRQDDVADFTFITCQEEMEPQFQIVANKVVPNLLAKNIPLNEIGIIASS
REQIHQMAHYLQREGIPFFIVNWNFENSEVVVWLQECALWCNDPESQSFDELFKTWKRKL
IEVHLDPRENWEDIRLKKLFYKVLNESLSKSNCYGWLRHIIDNLGLKKTLTGSEIYPNEV
NNLEKLLEEAKLHNLKDTTIKRFAHLGFPENQVTITTRHSSKGLEFETVILLGMEEERFP
DFRHLNNPIALAEDQRLCYVCISRAKKSCILLRSKIYNIPTRRGNWEKVFAPSRFWVSLH
NMFGNEQNTFTENNYPLLPGN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtttattttttagggatctcgaattaataaaaagggatgaaaggcaatatact
gcttaccggtcaatggcaaattctgtaattattgccggaccaggtagcggaaagactcgt
gttttaactttaaaggcagtaactcttgctaaaagtcatattcataaaccttgtgggctg
gcctgtatcagttacagcagagagtctgtgagagaacttaaaaagcgatttaaatcgtac
ggttatgttccaactcataaggattttatagggacagtccatagttttagtctattgcat
gtaatccaaccgtttgcacatttatatcctcagtataatgtaacgtatccgattaagatt
cttcctgatgaagtaaaaaccggactttataattcggtacttcacgagctaaaaattgag
gatggtcgtactttaacattaactgatattaataaacatagatcgttatccataagggga
cgtagcgaggtcaatatggaatcatctcccttagtggcaaagggagctgaactctttgaa
aaaaaactaagcgaaactgaatttattgatttcgttagtataattaatctatctgcaaaa
attatcaatgaacaggattatgttagagagacattgagaagccaatttccatggctctta
gtggacgaatatcaggatttgggtaaggctttacacgaaatggttcttgagttggtattt
aacgccgacataaaactatatgctgttggcgacaccaatcagtccatctatgggtttaat
ggtggttatcctgattttttggaggaacttactaccaatgataatataaaaacaattgag
cttatttctaattacaggagttcacaacacatcatcaatgcctcaagagaagccctacag
ccgactcctccttatccggaatatgtttcaggtaacagacaggatgacgtggcagatttt
acttttattacatgtcaggaagaaatggagccgcaatttcaaattgtagccaataaagta
gttccaaatctgttagctaagaatatacctttgaatgaaattggaattatagcaagttct
cgggaacaaattcatcagatggctcactatttacagcgggaaggaatacccttttttatt
gtaaactggaactttgaaaatagtgaagttgttgtctggttgcaagagtgtgctttatgg
tgtaatgatcctgaatcgcagtcattcgatgaattatttaaaacctggaaaaggaagctc
attgaagttcatcttgatccccgtgaaaactgggaggatattcgattaaaaaaactattt
tataaagtattaaatgagagtttgagtaagtctaactgctatggctggcttagacatata
attgataatttagggttaaaaaaaacgcttacgggttcggaaatctatcccaatgaagtt
aacaacttagaaaaattgttagaagaggcgaaacttcataacctgaaagatactaccata
aaaagatttgctcatctaggttttccggagaatcaagtaacgattaccacaaggcacagt
tcaaaggggcttgaatttgaaactgtcattttgctcgggatggaagaggaacggtttcct
gacttcaggcatctcaataaccctatagcattggctgaagatcagcgcctatgctatgtt
tgtatcagcagggctaaaaaatcatgcattctactgcgatctaaaatatataatatccca
acaagaagagggaattgggaaaaagtatttgctccatcaagattttgggtaagtctccac
aatatgtttggaaatgagcaaaatacttttacagaaaataactaccctttattacctggt
aactag
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