Chryseobacterium arthrosphaerae: EGY05_10730
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Entry
EGY05_10730 CDS
T05746
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGY05_10730 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carh03019
]
EGY05_10730 (recQ)
03400 DNA repair and recombination proteins [BR:
carh03400
]
EGY05_10730 (recQ)
Enzymes [BR:
carh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGY05_10730 (recQ)
Messenger RNA biogenesis [BR:
carh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EGY05_10730 (recQ)
DNA repair and recombination proteins [BR:
carh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGY05_10730 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AYZ12370
LinkDB
All DBs
Position
complement(2306051..2308255)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEQIIDNLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKDDYLDFLKEVKISFFAIDEAHCISEWGHDFRPEYRNLKQIIDKIADVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVCPKINVDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKIRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGESFDPVNGDGAKMCDNSSNPPKLKDATADLKKA
LELIRDTGEKFKSKDLISVIVGKETAVTKSYKLEQSSHFGFGKEEKDNYWKTILRQATVQ
NFLQKDIETYGVLKITEKGKNLLSGKSKDTFLIAEDREFDLTQAKADSDQLQQQAGGGLD
QKLFTLLKELRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVDEINKIYGVGEGKAKKYG
KEFADYIKTYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMDE
LLKEMERIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKILLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattgaaaaagtattttgggttttctaca
tttaagggccagcaggaacagatcatagacaacctattgaatgggaaggatatttttgtt
ctgatgcctacaggaggtgggaaatcactatgttatcagcttccggcacttatttcggaa
ggtacggcaattgtcgtttcgcctttaatagcgttgatgaagaaccaggtagatgcagtg
aacggcctttcatctgacgatggggtagcgcatgtattgaattcatcattgaataagaca
cagaccaagcaggtatttgacgatatcaaaagcggcaagacaaagcttctgtatgtagct
cccgaatcattgatcaaagatgattacctggactttttgaaggaagtaaagatatctttc
tttgctatcgatgaagcacattgtatttcagaatggggacatgatttcagaccggaatac
agaaatctgaaacagatcatagataagattgccgatgtaccggtgattgcattaacggcc
acagcaactcctaaagtacaggatgatatccagaaaactttgggaatgacaaatgcgctg
gtctttaaagaaagtttcaaccgtcccaacctatattatgaagtatgtcctaagattaat
gtagataaggaaatcgttaagtttatcaatcagcataaaggaaaatctggaattgtgtac
tgcctgagcagaagaaaggtggaagaatttgcccagcttttgcaggtgaacggcatcaat
gcacttccttaccatgccggccttgaccagaaaataagggtagccaatcaggataagttt
ctgatggaagaagtggatgtgattgttgctacgatcgctttcgggatgggaattgacaaa
ccggatgtccgttttgtgatccattacgattttccaaaatccctggaaagctattaccag
gaaacgggaagagcaggaagagatggtggtgaaggccattgtctggctttctatgacccg
aaagatattgaaaaactggaaaaattcctggcacagaaacctgtttccgaaagagaaatc
ggattgcagcttctgaatgaagtggtaggctatgctgaaacttcaatgagccgcagacaa
tacattttatattatttcggagaaagtttcgatccggtaaacggagacggagcaaagatg
tgtgacaactcatccaatccgcccaaattgaaagatgcaacggccgatcttaaaaaagct
ttggagctgatccgggataccggggaaaagtttaaatccaaagacctgatttctgtgatt
gtgggaaaagaaactgccgttacaaagtcttataagcttgagcaaagttcacatttcgga
ttcgggaaagaagaaaaagacaattactggaaaacgattctgagacaggcaaccgttcag
aattttttacagaaagatattgagacatacggtgttctgaagattacagagaaagggaaa
aatttattgagcggtaaatccaaagatactttcctgattgctgaagacagggaatttgat
cttacccaggcgaaagcagacagtgatcagctgcagcaacaggccggaggaggtctagac
caaaagctgtttaccctgttaaaggaattaaggaaaaaagtagccaaaaaacacggaatc
ccgccttacacggtgtttatggacccgagtcttgaggatatgacagtgcagtacccgatt
acagtagatgaaatcaacaaaatttatggagtaggagaaggaaaagccaaaaaatacggt
aaagaattcgctgactacattaaaacctatgttgaggacaataacatagaacgtacccag
gacatggtattgaaacaggtggccaacaaatccagccacaaggttttcattatccagagt
accgataaaaaaattgatcttgaagatattgcaagagccaaaaatctctctatggatgag
cttctgaaagagatggaaagaatcgtataccagggaacaaaactgaatatcgattattat
attgaagacaattttgatgaagatattgtagacggcttcatggaattcatgaatgaatct
gaaagtgacagtatgaagattttactggatgaatttggagatgaactgtctgatgaagaa
gtaagaatgctgagaattaaatttatcagcgacgtagcaaactag
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