Chryseobacterium arthrosphaerae: EGY05_14640
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Entry
EGY05_14640 CDS
T05746
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
carh
Chryseobacterium arthrosphaerae
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carh03032
]
EGY05_14640
03400 DNA repair and recombination proteins [BR:
carh03400
]
EGY05_14640
Enzymes [BR:
carh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EGY05_14640
DNA replication proteins [BR:
carh03032
]
Prokaryotic type
DNA Topoisomerases
EGY05_14640
DNA repair and recombination proteins [BR:
carh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EGY05_14640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AYZ13094
LinkDB
All DBs
Position
3187903..3189015
Genome browser
AA seq
370 aa
AA seq
DB search
MEKNTEVEIISHLKPSKIVKIMKDPEASAKAVHLVYTTDADTAGITRKKTGKKYSYYKDG
EKIRDKDEITRINKLVIPPAWENVWICALENGHLQATGFDVKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPNMRLHIEQDLALRNFEKRKILALIVSLMQRTNIRIGNNVYEKLYGSF
GLTTLKDKHVEVKGQKIIFSFKGKKGVMHHVDLRNKKLARLVQKCKDIPGKELFQYLDDE
GNRHSVDSGMVNDYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENNTEYKYKKKVK
EALDIVADHLGNTTAVCRKYYVHPLVINLYENNTIKKYLDELDVIEENDGKASLTKEEKL
VLKILENEKL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagaggtagagatcatttctcatttaaagccttcaaaaattgttaaa
atcatgaaggacccggaagcttctgcaaaggcggtacaccttgtatatactaccgatgca
gacacagccgggattacccgtaagaaaacagggaagaaatattcttattacaaagacgga
gaaaaaatccgggataaggatgaaatcacaaggatcaacaagctggtcattcctccggcc
tgggaaaacgtatggatctgtgctctggaaaacggccatcttcaggctacaggttttgat
gtaaagaaaagaaagcagtaccgctatcatcctttatggagtgccttacgaaatcacaca
aaattttacaggatgctccagttcgggtatgcgttacccaatatgagacttcatattgaa
caggatcttgcgttgcggaattttgaaaaacgtaaaatactggctctgatcgtgagcctt
atgcagagaaccaatatccgtatcgggaacaatgtctatgaaaagttatacggatctttc
ggattgacaaccttaaaagataaacacgtagaagtaaagggacagaaaatcatcttctcg
ttcaaaggaaaaaagggagtcatgcaccatgtggatctcagaaacaaaaaactggcaagg
ctggttcagaagtgcaaggatattcccggaaaggaacttttccagtatcttgatgatgaa
ggaaaccggcattctgtagattccggaatggtgaatgattatatcaaagaaataagcggt
gaagattttacagctaaagatttcaggacctggtccggaacggtaagtgccctgatcgca
tttaaagagatcgggtatgcagaaaataacacggaatataaatataaaaagaaggtaaag
gaagccctggatatcgtagcagaccatcttggcaataccactgccgtatgccggaaatat
tatgtgcatcctctggtcatcaacctgtatgaaaataataccatcaaaaaataccttgat
gagctggatgtgatagaggaaaacgatggaaaagccagccttaccaaagaagaaaagctt
gttctgaagatcctggaaaacgaaaaactgtag
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