Chryseobacterium arthrosphaerae: EGY05_16290
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Entry
EGY05_16290 CDS
T05746
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh00020
Citrate cycle (TCA cycle)
carh00640
Propanoate metabolism
carh00660
C5-Branched dibasic acid metabolism
carh00720
Other carbon fixation pathways
carh01100
Metabolic pathways
carh01110
Biosynthesis of secondary metabolites
carh01120
Microbial metabolism in diverse environments
carh01200
Carbon metabolism
Module
carh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
carh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGY05_16290 (sucD)
00640 Propanoate metabolism
EGY05_16290 (sucD)
00660 C5-Branched dibasic acid metabolism
EGY05_16290 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
EGY05_16290 (sucD)
Enzymes [BR:
carh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EGY05_16290 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
DapB_N
Motif
Other DBs
NCBI-ProteinID:
AYZ13397
LinkDB
All DBs
Position
complement(3535658..3536530)
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AA seq
290 aa
AA seq
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MSILVNKDSKVIVQGFTGNEGTFHAGQMIEYGTNVVGGVTPGKGGSEHLGKPVFNTVADA
VEKAGANVSIIFVPPAFAADAIMEAAEAGIKVIVCITEGIPVADMVKVKSYIADRDCRLI
GPNCPGIITSEEAKIGIMPGFVFKKGKVGIVSKSGTLTYEAADQVVRAGFGISTAIGIGG
DPIIGTTTREALELFINDPETEAVVMIGEIGGGLEAEAARWYKASGSTKPVVGFIAGQTA
PKGRTMGHAGAIVGGAEDTAQAKMEIMRENGINVVDSPADIGATVAKVLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagtaaacaaagattctaaagtaattgtacaaggatttacagggaacgaa
ggaactttccacgctggtcagatgattgaatacggaacaaacgtagtaggtggtgttact
ccgggaaaaggaggtagcgagcacttaggaaagcctgtattcaacaccgtagctgacgct
gttgaaaaagcaggagctaacgtaagtatcattttcgtaccaccggcattcgcagcagac
gcgatcatggaagctgctgaagcagggatcaaagtaatagtatgtattactgaaggtatt
cctgtagctgatatggtaaaagtaaaatcttacatcgctgacagagactgcagattaatc
ggaccaaactgccctggaatcattacttctgaagaagctaaaattggtattatgccaggt
ttcgttttcaaaaaaggtaaagtaggtatcgtttcaaaatcaggtacccttacttacgaa
gctgctgaccaggttgtaagagcaggtttcggtatttctacagcaatcggtatcggtggt
gacccaatcatcggaactactacaagagaagctctggaattattcatcaacgatcctgaa
actgaagcggttgtaatgatcggtgaaatcggtggaggattagaagctgaagctgcaaga
tggtacaaagcaagcggatctactaagccggttgtaggattcatcgccggacagacagct
ccgaaaggaagaacaatgggacacgctggtgctatcgtaggaggtgcagaagatacagct
caggcaaaaatggaaatcatgagagaaaacggtatcaacgttgttgattctcctgctgac
atcggtgctactgtagctaaagttctaggataa
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