Chryseobacterium arthrosphaerae: EGY05_16345
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Entry
EGY05_16345 CDS
T05746
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
carh
Chryseobacterium arthrosphaerae
Pathway
carh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGY05_16345 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carh03400
]
EGY05_16345 (xth)
Enzymes [BR:
carh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EGY05_16345 (xth)
DNA repair and recombination proteins [BR:
carh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EGY05_16345 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF4284
Motif
Other DBs
NCBI-ProteinID:
AYZ13408
LinkDB
All DBs
Position
3546997..3547761
Genome browser
AA seq
254 aa
AA seq
DB search
MRLITYNVNGIRAAFTKDFLGWLKTADPDIIAIQESKAGNDQIDIESLEKLGYHSYWHSA
VRKGYSGVGIASKIKPNHVEYGCGIESYDNEGRIIRADFDDFSAISVYVPSASNIERLDF
KMQFCHDFLEYIKNLKKEIPNLIISGDFNICHEAIDIHNPAGLKNVSGFLPMEREWMTSF
INECELIDSFRFFNNEPDHYTWWSYRQNSRERNKGWRLDYNFTSYSLKDKLTRAVILKEA
VHSDHCPALLELDI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagattaattacctacaatgtcaacggaatccgggcagcatttaccaaagatttttta
ggctggctgaagactgcagatccggatattatagccattcaggagagcaaagccggaaat
gaccagatcgatattgaaagccttgaaaaactgggctatcacagttattggcattccgca
gtaagaaaaggctacagtggggtcggaattgcctcaaaaataaaacccaaccatgtagag
tatggctgcggtattgaaagctatgataatgaaggcaggatcatccgcgcagattttgat
gatttttctgccatttccgtgtatgtaccttctgcctccaatattgaaagactggatttt
aaaatgcagttctgccatgacttcctggaatacatcaaaaatttaaaaaaggaaattccc
aatctgattatttccggtgattttaatatctgccatgaggctattgatattcataatccc
gcaggcttaaagaacgtttcaggctttcttcctatggaaagggaatggatgaccagtttc
atcaatgaatgtgagctgattgacagtttcaggtttttcaataatgagccggatcattat
acctggtggagctacagacagaattcaagggaaagaaacaaaggctggagactagattac
aacttcacatcctatagcttaaaggataagcttacacgggcggttattttaaaggaagct
gtgcattctgaccactgccctgctttgctggaattggatatataa
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