KEGG   Chitinimonas arctica: FNU76_03150
Entry
FNU76_03150       CDS       T06695                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
cari  Chitinimonas arctica
Pathway
cari03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cari00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FNU76_03150 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cari02044]
    FNU76_03150 (tssM)
Secretion system [BR:cari02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FNU76_03150 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QDQ25432
UniProt: A0A516SBA5
LinkDB
Position
complement(680142..683573)
AA seq 1143 aa
MIKRIAGWLAKPLVLSLLLAVLLALLVWFQGPRIAVDGKAPLAAVMVRVQLILVLLGIWL
LYWSLRGLAGKLSGVRLVMPGTAALAPDEQNSIDQRNALAHGFREAQRLLRRVGLASRLR
GHDIYKLPWYLLLGASASGKSSVLQQSGLRFPAAMMPADGRGNGAPCDWWIAERAVLLDV
AGRCTLAPQRDRAELAVWDTLLQYLRRYRRRCPLNGVIVTLNVADLWQDEAARAAQANLL
HERISELHLGLGTQFPVYLLVTQCDRLPGFADYFEDLGRDQRAQVWGMSFPLREPDQVDD
SLADFPAQFQALVGQMHARLVDRLQQESDLERRAAIHGFPIQFAALGERLAHFLHEAFES
SRFRPNTMLRGVYFSSAQQEGSLPMQAISPLAAQLRTPDIATPMAGEPRAFFLTRLLREV
IFQESGLAGANWKLERRRGWLQRAAVGAIAVTGLLAAVLLLSNYTHQREQQTAVSRASVE
LQRWTRNGYNIHQPETLLPLLDTARAIPGGDGRPAPETLLLRYGPYRGERLDGAGQALYQ
RILQQTLRPYLLNRLGEALRTEGLDPSQRYQTLRAYLMLGNRSVYDAATVLDWIDRDTRG
RSGLDGQQKAGLAVHFAALTQGRQVVRDQTADPELVARARVELARQPLAQRLYEPLRVKL
LRAVAEPYSVSQMAGINAPLVLSRRSGRLLSQGVEGAYTRSGYIRYLQLRDQAIADLNQQ
NWVLGKSEAMADAREAGTLKQALDGLYFAEYIERWEALLGDVTLLAPTTLEHQASVVKLL
AAADSPMRQFLQAVAKQTSFDSDATAKAAPTNSAASTNPVEQHFTALHQMVGRPGMAGPA
PLEQIQAQLKEVGVYLDAALSASQRGVAAPPADEALARLRLAAEGQPELIGSLLGALAGS
SASLALSGERERLNALWLATVAPACRQALDGRYPFNRQSAQDVNPDDFGRLLGPGGLVDD
FFQKNLLRYVDTTAGQWRWRSQAQASLALPQSVLQEFERAAAIRDAFFADGGKVAAVRFE
LTPIGMDANLTRFALDLGGQTLVYAHGPARPTAFRWPAAQAARPARLDYAPNLAEAGGGI
SINGSWALFHLLDKAKLEPLQLDRFNLTFDLGGKQVALALNAASVVNPFNLAALSQFRCP
DSL
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgatcaaacgaattgctggctggcttgccaagccccttgtcctctcgcttttgctggcc
gtgctattggcgctcctggtctggttccaggggccgcgtatcgccgtggatggcaaagcc
ccccttgcggccgtgatggtccgtgttcaattgatcctggtcttgctgggtatctggctg
ctgtattggagcctgcgcggcctggccggcaaattgtcgggtgtgcgtttggtcatgccc
ggcacggctgcgctggcgccggacgagcagaacagcatcgaccagcgcaatgcgctggcg
cacggttttcgcgaagcgcagcggctgttgcgccgggtcgggctggctagccggctacgc
ggacacgacatctacaaattgccctggtacctgttattgggtgcctcggccagtggcaaa
agcagcgtgctgcagcaatccggcctgcgtttccccgccgccatgatgcccgccgatgga
cgcggcaacggcgcgccctgcgattggtggatcgccgagcgggcggtattgctggatgta
gccgggcgctgcacgctcgcaccgcagcgcgaccgcgccgagctggcggtctgggacacg
ctgttgcagtatttgcgccgctaccgtcgccgctgcccgctcaatggcgtgatcgtcacg
ctcaatgtcgccgatctctggcaggatgaagcggcgcgggcggcccaggccaatctgctg
catgagcgcatcagcgaactgcatctgggcttgggcacccagtttcccgtctatctgctg
gtgacccagtgcgatcggctgcccggcttcgccgactatttcgaagacctgggacgcgac
cagcgcgcgcaggtatggggaatgagctttcccttgcgcgaaccggaccaggtggacgac
agcctggcggactttccggcccaattccaggccctggtcggccaaatgcatgcgcggctg
gtcgaccggctgcaacaggaaagcgacctggaacggcgcgccgccatacacggctttccg
atccagttcgccgccttgggcgaacgattggctcattttctgcacgaggctttcgagtcc
tcgcgttttcggcccaataccatgttgcggggcgtgtatttcagcagcgcccagcaagag
ggtagcttgcccatgcaggcgatcagccccttggcggcacagctgcgcacgcccgatatc
gccacccccatggcgggggagccgcgcgctttcttcctgacccgcctgctgcgcgaagtg
atcttccaggaatccggtctggccggcgccaactggaagctggagcggcgccggggctgg
ctgcagcgggcggcggtgggcgccatcgcggtgaccggtttgctggcggcggtactcctg
ctaagcaactatacccatcagcgcgagcaacaaacggcggtcagccgggcgagtgtggaa
ttgcagcgctggacgcgcaatggctacaatattcaccagcccgagaccctcttgccattg
ctggacaccgccagggcgatccccggcggcgatggccggcccgcgccggagaccttgctg
ctgcgctacggcccttatcgcggcgagcgtctggatggtgccggccaagccctgtaccaa
cgcatcctgcaacagaccttgcggccttatctgctgaatcgcctgggcgaggccttgcgg
accgagggattggatccgtcccaacgctatcagaccttgcgggcctacctgatgctgggc
aatcgcagtgtctacgatgccgccacggtattggactggatagatcgcgatacacgtggc
cgcagtgggctggatgggcagcaaaaagccggcttggcggtacatttcgccgcgctgacc
caggggcggcaagtggtccgcgaccaaaccgccgatccagagctggtagcccgtgcccgc
gtcgaattggcccgtcaacccttggcgcaacggttgtacgaaccactgcgcgtcaagctg
ctgcgggccgtggccgaaccctattcggtcagccagatggcgggcatcaacgcaccgctg
gtgctgagccggcgcagcgggcgcctgctcagccaaggggtggagggtgcctacacgcgg
tccggctatatccgctacctgcagttgcgcgaccaggccatcgccgacctgaaccagcaa
aactgggtgttgggcaaaagcgaggccatggctgacgcgcgcgaagccggcacgctgaag
caggcactggacggcctttacttcgccgaatacatcgaacgctgggaagcgctattgggc
gatgtgaccttgctggcgccgaccacgctggagcaccaggcttcggtggtcaaactgctg
gcggcggccgattcgcccatgcggcagtttttgcaggcagtagccaagcagacgagtttc
gatagcgatgcgaccgccaaagcggcgcctacgaacagtgccgccagcaccaatccggtc
gaacagcattttaccgccctgcatcaaatggttgggcggccgggcatggccgggccggcg
ccgttggagcagatccaggcgcagttgaaggaggtcggggtctatctcgatgcggccttg
tccgccagccagcggggcgtggccgcaccgcccgccgacgaagcgctggcccgtttgcgc
ttggcggccgaaggccagccggaattgatcggttccctgctgggcgcactggctggcagc
agtgcctccctggcgctgagcggcgagcgcgagcgcttgaatgcgctgtggttggcgacc
gtggcgccggcctgccgccaggcactggatggccgctatccattcaaccggcaaagcgca
caggacgtcaatccggacgatttcggccggctgctgggtccaggcggcctggtggacgat
ttctttcagaagaacttgctgcgctatgtcgataccacggccggccaatggcgctggcgt
agccaggcgcaggccagcctggcgctgccgcagagcgtactgcaggagttcgagcgggcc
gccgccatccgcgatgcttttttcgccgacggcggcaaggttgcggcggtacgtttcgag
ctgacgcccattggcatggacgccaacctgacccgcttcgccctcgacctcggcggccag
accctggtttacgcccatggcccggctcgccccaccgcttttcgctggccggcggcgcaa
gcggcacggccggctcgactggactacgcccccaatctcgccgaagccggtggcggcatc
agcatcaacggtagctgggcgctatttcatttgctcgataaagccaagctggaaccgctg
caactggaccgcttcaacttgacattcgacctgggcggcaagcaggtggctttggccctg
aatgccgccagcgtggtgaatccgttcaatcttgcggcattgagccagttccgctgcccg
gacagtttgtaa

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