Chitinimonas arctica: FNU76_04965
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Entry
FNU76_04965 CDS
T06695
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cari
Chitinimonas arctica
Pathway
cari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNU76_04965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cari03021
]
FNU76_04965
03019 Messenger RNA biogenesis [BR:
cari03019
]
FNU76_04965
Transcription machinery [BR:
cari03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FNU76_04965
Messenger RNA biogenesis [BR:
cari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNU76_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
Mor
AAA_22
ATPase_2
AAA
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDQ25750
UniProt:
A0A516SC77
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All DBs
Position
1134987..1136237
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AA seq
416 aa
AA seq
DB search
MHLSDLKHKHVSELVDMATDIDGANRMRKQDLIFALLKSQAKKGESIFGDGTLEVLPDGF
GFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKVDRVNND
TPEATKNKILFENLTPLFPTERMTLERDIKAEENITSRVIDLIAPIGKGQRGLLVAPPKS
GKTVMLTHIAHAITANHPDVILIVLLIDERPEEVTEMTRTVRGEVVASTFDEPPTRHVQV
AEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQKPKRFFG
AARNIEEGGSLTIIATALTDTGSRMDDVIYEEFKGTGNMELHLDRRMAEKRIYPAINVNR
SGTRREELLIPSEQLQKIWVLRKLLYPMDELEAMDFLLGKVKGTKNNNDFFDSMRR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtcagacctaaagcacaagcacgtatccgagctggtcgatatggccaccgat
atcgacggtgcaaaccggatgcgcaagcaggacctgatcttcgccttgctgaagagtcag
gccaaaaagggcgaaagcattttcggcgacggcactctggaagtgctgcccgacggcttc
ggtttcttgcgtagccccgacaccagctatctggccggtccggacgatatctacgtttcc
ccctcgcagatccgccgtttcaatctgcacacgggcgacaccatcgaaggcgagatccgc
acccccaaggatggggagcgctacttcgccctggtgaaggtggatagagtcaataacgac
acgccggaagccaccaagaacaagatcctcttcgaaaacctgacgccgctgttccccacc
gagcgcatgacgctggaacgcgatatcaaggccgaagagaacatcaccagccgggtgatc
gacttgatcgcgccgatcggcaagggccagcgcggcctgctggtcgccccgcccaagtcg
ggcaagaccgtgatgctgacgcatatcgcgcatgccatcaccgccaaccatcccgacgtg
atcctgatcgtgctgctgatcgacgaacggccggaagaagtgaccgaaatgacgcgcacg
gtgcgcggcgaagtggttgcctccaccttcgacgaaccgccgacacgccatgtgcaggtt
gccgaaatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtggtcatc
ctgctggactccatcacccgcctggctcgcgcctacaacaccgtgatcccggcatcgggc
aaggtattgaccggtggtgtggacgccaatgccctgcaaaagcccaagcgcttcttcggc
gccgcccgcaatatcgaggaaggcggctcgctgaccattatcgccaccgcgctgaccgac
accggcagccgcatggacgatgtgatctacgaagaattcaagggtaccggcaatatggaa
ctgcatctcgaccgccgcatggccgagaagcgcatctacccggcgatcaacgtcaaccgc
tccggcacccgccgcgaggaattgctgatcccgtccgaacagctgcagaaaatctgggtg
ctgcgcaagctgctctacccgatggacgagctggaggcgatggacttcctgctgggcaag
gtcaagggcaccaagaacaacaacgacttcttcgactcgatgcgtcgctaa
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