Chitinimonas arctica: FNU76_06490
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Entry
FNU76_06490 CDS
T06695
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cari
Chitinimonas arctica
Pathway
cari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cari00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNU76_06490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cari03019
]
FNU76_06490 (recQ)
03400 DNA repair and recombination proteins [BR:
cari03400
]
FNU76_06490 (recQ)
Enzymes [BR:
cari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNU76_06490 (recQ)
Messenger RNA biogenesis [BR:
cari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FNU76_06490 (recQ)
DNA repair and recombination proteins [BR:
cari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FNU76_06490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDQ29231
UniProt:
A0A516SM46
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All DBs
Position
1473854..1475656
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AA seq
600 aa
AA seq
DB search
MQTQALEVLQKVFGYEQFRGRQAEIVAQVAGGGDALVLMPTGGGKSLCFQIPALLRPGCA
VVISPLIALMQDQVEGLHQLGIAAAFLNSTLDAHAAREVEQSYMRGELKLLYVAPERLLT
PRFLALLEHTPASLFAIDEAHCVSQWGHDFRPEYIGLSLLHERFPSVPRIALTATADAAT
RREIVTRLALENAAQFVSSFDRPNIRYRIIEKDNARKQLLAFIEREHHGDAGIVYCLSRK
RVEETAAFLSANGITALPYHAGIAAEIKAGNQTRFLREDGIVMVATIAFGMGIDKPDVRF
VAHIDLPKSLEGYYQETGRAGRDGLPSNAWLAYGLNDVMQLKEMIESGGSPDAQKQVERD
KLNAMLGLAETVACRRQVILGYFGENAVPCGNCDNCLVPPTTWDATDAARKALSCVFRTG
QRFGAGHVIDVLLGKTTEKVKQHFHHTVTTFGIGKELPEAGWRSVLRQLLAAGFLQTDTE
FGGLQLTPAARPLLKGEMQLRLRGLPEKQRDKTDRDKKRSAASLDIAATDEPLWQRLRST
RRALADEQSVPAYLIFTDATLKAMLDAKPATLADMAHISGVGAQKLERYGLAFLDALHAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacaggcactggaggtattgcagaaggtcttcggctacgagcagttccgtggc
cgccaggccgagatcgtggcccaggtggccggcggcggcgatgcgctggtcttgatgccc
accggtggcggcaaatcgctgtgcttccagattccagccttgttgcggccaggctgcgcg
gtggtgatctcgcccttgatcgccttgatgcaggaccaggttgaaggcctgcatcaattg
ggtatcgcggctgctttcctgaactccaccctggatgcccatgcggcgcgcgaggtggag
caaagttatatgcggggcgaactgaaattgctttatgtcgcccccgagcgtttgctgacg
ccgcgcttcctggccttgctggaacacacgccggccagtctgttcgctattgacgaagcg
cattgcgtgtcgcaatgggggcacgatttcaggccggaatacatcggcctgtcgctgctg
cacgagcgtttcccctcggtaccccggatcgcgctgaccgcgaccgccgatgctgctacc
cgccgggaaatcgtcacgcggctggccttggaaaatgccgcccagttcgtctcgtctttc
gatcggcccaatatccgctaccgcatcatcgagaaggacaacgcccgcaagcagctgctg
gcctttatcgagcgcgagcaccatggtgacgcgggaattgtctactgcctcagccgcaag
cgcgtggaagagaccgccgcctttctatccgccaacggcattaccgccctaccctatcac
gccggcatcgccgccgagatcaaggcaggcaaccagacccgcttcctgcgtgaagacggc
attgtcatggtggccaccattgctttcggcatgggcatagacaagccggatgtacgcttt
gtcgcccatatcgacctgcccaagagcctggagggctactaccaggaaaccggccgggcc
ggccgcgatggcctgccatcgaatgcgtggctggcctatggcttgaacgatgtgatgcag
ttgaaggagatgatagaaagcggcggttcgcccgatgcgcagaagcaggtcgaacgggac
aagctgaacgccatgctgggcctggccgaaacggtggcttgccggcgccaggtcatcctc
ggctatttcggtgaaaatgccgtgccgtgcggcaattgcgacaactgcctcgttcctccc
accacttgggatgccaccgatgccgcccgcaaggcgctcagttgcgtattccgcaccggc
cagcgcttcggcgccggccatgtgatcgatgtgttgctcggcaagaccaccgagaaggtc
aagcagcacttccaccatacggtcaccactttcggtatcggcaaggagctgccggaagcc
ggctggcgttcggtactccggcaattgctggccgcgggtttcctgcagaccgatacggag
ttcggtggcctgcaactcacgcccgctgcccgtcccctgctgaaaggggaaatgcagctg
cgtttgcgcggcctgccggaaaaacaacgcgacaagaccgaccgcgacaagaaacgttct
gctgccagcctcgatatcgcggctacggacgagccattgtggcagcgcctgcgcagtacc
cgacgcgccctggccgacgagcagtcggtgccggcctatctgattttcaccgatgccacg
ctgaaagccatgctggatgccaagcccgccacactggcggatatggcacacatttccggc
gtgggtgcgcagaagctggagcgctatggcctggcttttctggatgcgttgcacgcgggc
tga
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