Chitinimonas arctica: FNU76_08275
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Entry
FNU76_08275 CDS
T06695
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cari
Chitinimonas arctica
Pathway
cari03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cari00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNU76_08275 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cari03021
]
FNU76_08275 (rpoA)
03400 DNA repair and recombination proteins [BR:
cari03400
]
FNU76_08275 (rpoA)
Enzymes [BR:
cari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNU76_08275 (rpoA)
Transcription machinery [BR:
cari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNU76_08275 (rpoA)
DNA repair and recombination proteins [BR:
cari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNU76_08275 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
QDQ26360
UniProt:
A0A516SE21
LinkDB
All DBs
Position
complement(1850067..1851047)
Genome browser
AA seq
326 aa
AA seq
DB search
MSNANDLLKPRNIDVQASSPTQARVVMEPFERGYGHTLGNALRRILLSSMPGYAPTEVKI
EGVLHEYSALDGVQEDVVDILLNLKGVVLKLHGRGEALLTLKKDGEGVVKASDIEVPHDV
EIVNPDHVIANLSAGGKLAMEIKVEKGRGYQPAVVRLDKEEGRNIGSILLDASFSPIRRV
SYAVESARVEQRTDLDKLVMEIETNGAIEPEEAVRFAARVLVEQLAVFADLQSTEVEPEA
PRAPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEI
KEVLASKGLTLGMKLENWPPVGLEKP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgcgaatgacttgctgaaaccacgcaatattgatgtgcaggcatcgtcgcct
acccaggcgcgtgtcgtgatggagccattcgagcgtggctacggtcatacgctcggcaat
gcattgcgccgtatcctgctgtcgtccatgcctggttacgctcctaccgaggtaaagatc
gagggcgtgctgcacgagtactccgcgcttgacggtgttcaggaggatgtcgtcgatatc
cttctgaacctcaagggcgtggtgttgaagctgcatggtcgtggcgaagcattgttgacc
ctgaagaaagatggcgaaggcgtagtcaaggccagcgatatcgaagtccctcacgacgtc
gaaatcgtcaatcctgaccatgtgatcgccaatctctccgcgggcggcaagcttgccatg
gagatcaaggtcgaaaaaggccgtgggtaccaacccgcggtggtgcgtctggacaaggaa
gagggccgtaatatcggttccatcctgctggatgcttcgttcagcccaattcgccgtgtc
agctacgcggtcgagagcgctcgcgtcgagcagcgcaccgacctcgacaagctcgttatg
gaaatcgagactaacggcgcaatcgagccggaagaagcggtgcgtttcgccgctcgcgtc
ttggtcgagcaattggctgtctttgctgatctgcagagtacggaagtcgaacctgaggcg
cctcgcgctccgcaggtcgatccaattctgctccgcccggttgacgatcttgagctgacc
gtacgttcggcaaattgcctcaaggctgaaaacatttattacatcggtgacctgatccag
cgcactgaaaccgaactgttgaagaccccgaacctgggccgcaagtctttgaacgaaatc
aaggaagtgcttgcctccaagggtctgacgctcgggatgaagctggaaaactggccgccg
gtcggcctggaaaagccttaa
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