Chitinimonas arctica: FNU76_09795
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Entry
FNU76_09795 CDS
T06695
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cari
Chitinimonas arctica
Pathway
cari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNU76_09795 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cari03400
]
FNU76_09795 (recD)
Enzymes [BR:
cari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNU76_09795 (recD)
DNA repair and recombination proteins [BR:
cari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNU76_09795 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
RecD_N
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
DEAD
UvrD_C
SH3_13
nSTAND3
SRP54
AAA
FtsK_SpoIIIE
Zeta_toxin
HerA_C
AAA_24
NTPase_1
ATPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QDQ26632
UniProt:
A0A516SEP6
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All DBs
Position
complement(2145425..2147173)
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AA seq
582 aa
AA seq
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MNMVLLPGFAAELVAWLQRGFPAAGELALASAGLLACRTDEGHVCVDLVQEAGQRWNGQP
WPELGLWRGQLLASGFVAEPGGYAPLLLDGDRLYLARLWSDEVALAKQLLQRAGPGGALP
KQIKAALDPLFAGVPADDGQRLAAATALLNRVALIAGGPGTGKTTTVAKVLAALVMLQPG
CRIRLAAPTGKAANRMVEALAGAKAKLGLDLVTLAELPDQATTLHRLLGYRPDSATPRYG
ADQPLALDVLVVDEASMIDLALFSRLLQALPPDARLILLGDRDQLASVEAGSAFAELVKL
AGRTPEGAQRLAAASGSKQLARPGATLLGDGIAMLSQSHRFGGNSGIGELARRANAGDTA
GTLALLAEQRSDLAWQPGRASEWLPPMLAQLERQLDDYRSAVREADPVAAFQAFDRLRLL
CVVRDGPVGVAAINRLVETRLWRQDPRRQPWYAGRPVIVRASDAALGLANGDIGLCLAGP
DGLRVYFPQGDGWRALTPARLPAHDTAFALTVHQSQGSEFDAVWLLLPDEDVPVLSRSLI
YTAVTRARREVAVWGSATTLAAALARDVQRASGLLDRLRSAE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggtgctcttgcccggcttcgccgccgagctggtggcctggttgcagcgcggt
tttccggccgccggcgagctggccttggccagcgccggcctgctggcctgccgtaccgac
gagggacatgtttgcgtcgatctggtgcaggaggccggccagcgctggaacgggcagccg
tggccggagctggggctctggcgcggccagctgctggccagcggttttgtcgccgaaccc
ggcggctatgcgccgttgctactggatggcgaccggctctatctggcccggctatggtcg
gatgaagtggccttggccaaacagctgctgcaacgggcgggccctggtggtgcattgcct
aaacagatcaaggcggcactggaccccttattcgctggtgtgccggccgacgatggccag
cgtctggccgccgcgaccgcgctattgaaccgggtggccttgatcgccggcgggccgggt
accggcaagaccaccacggtggccaaggtgctggccgccctggtcatgctgcagcccggt
tgccggatccggttggccgcgcctaccggcaaggcggccaaccgcatggtcgaagcactg
gccggcgccaaggcgaagctgggcctggacttggtcaccctggccgaactgcccgaccag
gccaccaccctgcaccgcctactgggctatcgaccggacagcgccacgccacgctacggc
gccgaccagcccttggccctggatgtgctggtagtggatgaagcctccatgatcgacctg
gccctgttcagccgcctgctgcaggcgctgccgccggatgccaggctgatcctgctgggt
gatcgcgatcagctggcctcggtggaggccggcagtgcctttgccgaattggtcaagctg
gccggccgcacgcccgaaggtgcgcagcggctggccgccgccagcgggtcgaaacagctg
gcccggcccggcgccaccctattgggcgacggtatcgccatgcttagccaaagccatcgc
ttcggtggcaatagcgggattggcgagttggcgcggcgcgccaatgcgggagacaccgcc
ggcaccctcgcgctattggccgagcaacgtagcgacctggcgtggcagcccggtcgggcg
agcgagtggctgcccccgatgctggcgcaacttgagcggcaattggacgattatcgcagc
gccgtgcgggaggccgatccggtcgccgccttccaggctttcgatcgcctgcgcctgctg
tgcgtggtacgcgacggcccggtgggcgtagccgccatcaatcggctggtggaaacgcgg
ctttggcgccaggaccctcgccggcaaccttggtatgccggccgcccggtgatcgtacgg
gccagcgatgcggcactgggattggcgaacggcgatatcggcctgtgcctggccggcccg
gacgggctgcgcgtctatttcccgcagggcgacggctggcgtgcgctgacgcccgcgcgg
ctgccggcccacgacaccgcctttgccctgaccgtgcaccagtcgcaaggctcggaattc
gatgccgtctggctcttgctgccggacgaggatgtgccggtgttaagtcgtagtttgatc
tacacggcggtcacccgcgcccgccgcgaagtggccgtgtggggctcggccaccaccctg
gccgccgcgctggcgcgcgatgtgcagagggcgagtggattgctggaccgcctgcggagc
gctgaataa
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