Caproicibacterium argilliputei: PXC00_00570
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Entry
PXC00_00570 CDS
T09713
Name
(GenBank) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
carl
Caproicibacterium argilliputei
Pathway
carl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PXC00_00570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carl03400
]
PXC00_00570
Enzymes [BR:
carl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PXC00_00570
DNA repair and recombination proteins [BR:
carl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PXC00_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WOC32393
UniProt:
A0AA97DB58
LinkDB
All DBs
Position
127560..128342
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AA seq
260 aa
AA seq
DB search
MNLRRTLLCGQCFRWREIAPDVFAGTAGGRRLVLTQQDLPKLEQNPFWRRYFDFDTDYET
LRGQLAELHPNLREAARQSAGIHILRQDPWEALCSFILSQNNNIPRIQGIVSRLCQETEE
PLPHAAFQESAAAHPFPRPETLAGLTEAQLAPLRCGFRARYLLDAAQKVADGTVPLEQLR
TVPLAEARAALMQIVGVGPKVADCTLLYGLHRMEAFPVDVWMKRAMAQWFPGVEPAAFGA
AAGLAQQYIFNWARNGVAAG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcttcgcagaaccctgctttgcgggcagtgtttccgttggcgcgaaatcgcgccg
gatgtgtttgccggcaccgccggcggtcgccgtctggtcctgacgcagcaggatctgccg
aaactggagcagaatccgttttggcgccgctactttgacttcgataccgattatgaaacc
ctgcgcggtcagcttgccgaactgcaccccaatctgcgcgaggcagcccggcagagcgcg
ggcatccatatcttgcggcaggacccatgggaagcgctctgctcgtttattctgtcgcag
aataacaatattccgcgcatccaggggattgtcagccgcctttgccaagagaccgaagag
ccgctgccacacgcggcgtttcaggagagcgccgccgcacatccgtttccgcgtcccgaa
acgctggccgggctgacagaagcacagctcgcgccgctgcgatgcgggtttcgggcacgc
tatctgctggatgcggcgcaaaaagtggcagacggcactgtgccgctggagcagctgcgt
acggtgccgcttgccgaggcgcgtgctgcgctgatgcagattgtcggcgtggggccgaag
gtggcggactgcacgctgttgtatgggctgcaccgtatggaggcgtttccggtggatgtt
tggatgaagcgtgccatggcgcagtggtttccgggcgtggagccggcggcgttcggtgcg
gcggcggggcttgcccagcagtatatttttaattgggcgcggaacggtgtcgcggcaggc
tga
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