Caproicibacterium argilliputei: PXC00_04160
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Entry
PXC00_04160 CDS
T09713
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carl
Caproicibacterium argilliputei
Pathway
carl03420
Nucleotide excision repair
carl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PXC00_04160
03430 Mismatch repair
PXC00_04160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carl03400
]
PXC00_04160
Enzymes [BR:
carl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PXC00_04160
DNA repair and recombination proteins [BR:
carl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXC00_04160
MMR (mismatch excision repair)
Other MMR factors
PXC00_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Viral_helicase1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOC33081
UniProt:
A0AA97DCR4
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All DBs
Position
869425..871740
Genome browser
AA seq
771 aa
AA seq
DB search
MNERQREAVFSVNGPLLVLAGAGSGKTTVLVNRIANIIRYGSAYTDGTAELNNTDMQAAQ
AFLEGGAPLPDSVQQHMAVTPCAPWQILAITFTNKAAGELKQRLVNLLGNSGNDVWASTF
HSTCARMLRKYGDRLGYSTHFTIYDTDDSKRLMKGCLKELDVDEKFLACRAVLSEISHAK
DSLTDAKAYAQAAGTDNRLVTIAKAYQMYQQRLMEADAMDFDDLIFNTVRLLEQNSDVLA
YYQRKFRYIMVDEYQDTNHAQYVLVKLLAQKSQNLCVVGDDDQSIYKFRGATIENIMSFE
KTFPHAKVIRLEQNYRSTKTILDAANAVISNNTERKGKTLWTQNPQGEKIQTHTALNEQD
EADFIGKQILEGVGKGRKFSDYAILYRMNTQSSALEKNFVKSGIPYRIIGGLRFYERKEI
RDLIAYLSVINNPSDEVRLRRIINQPKRSIGDKTLAVASEIAGQIGESVFYVIAHADEFE
PLKRTAPKLLQFAEIMQGFMEINENEDRSVKELYDEILSKTGYIASLGNAQSDEVKDRVA
NLTQLGTNIQQYEEENDEAASLDGFLEEVALMTDIDNYDGDADTVVMMTMHSAKGLEFPV
VFLPGFEDGIFPGVQAIYDPVQIEEERRLAYVAITRAREELCVTNAQSRTLFGSTNRNRP
SRFLEEIPEELTEHTAARSWKQPKPGVALPVSAKEVRAAAMESALHFGAPESVQAQKAPN
FKPGDAVLHRAFGKGMVLSATPMGNDTLLEIAFDSKGTKKIMANFAHLKRA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacggcagcgggaagccgttttttctgtaaacggccctctgctggtactggca
ggtgcaggcagtggaaaaacgaccgttctggtaaaccgaattgccaatatcatccgatat
ggcagcgcgtatacagacggaacggcagaattaaacaatacagatatgcaggctgcgcag
gcatttctggagggcggcgcaccgctgccggacagtgtccagcagcacatggcagtgacc
ccctgcgcgccgtggcagattttagccattacatttaccaacaaagccgccggagagctg
aagcagcggctggtcaatctgctgggtaacagcggcaatgatgtttgggccagcaccttc
cactccacctgcgcacggatgctgcgcaagtacggcgaccgcctggggtacagcacgcac
tttacaatttatgacacagatgattccaagcggctgatgaagggctgcctgaaagaactg
gacgttgatgagaaatttcttgcctgcagggcagtactcagcgagatttcgcacgcaaag
gattcgctgacggatgccaaggcatacgcacaggctgccggaaccgacaaccgcctggtt
acgattgcaaaggcttaccaaatgtatcagcagcgcctgatggaagcggacgcgatggac
tttgacgacctgattttcaacacggtgcgcctgctggagcagaacagcgacgtgctggca
tattaccagcggaaatttcggtatatcatggtggacgaatatcaggataccaaccacgcg
cagtatgtgctggtgaaactgctggcgcagaaaagtcaaaacctctgtgtggtcggcgat
gatgaccagagtatctacaagttccgcggcgcaaccattgaaaatattatgagctttgaa
aaaacattcccccatgccaaggtcattcggttggagcagaattaccgctcgaccaaaacc
attttggatgctgccaatgcggtgatttccaacaacacggagcgaaagggcaaaaccttg
tggacacagaatccgcagggagagaaaatccagacgcatacggcgctcaacgagcaggac
gaggccgactttatcggtaagcagattctggagggcgtcggaaaagggcggaagttcagc
gattatgcgattctttaccggatgaacacacagtccagtgctctggaaaagaatttcgta
aagtccggcatcccataccgcatcatcggcggcctgcgcttctatgagcgcaaggagatc
cgtgacctgattgcgtatctgagtgttatcaacaacccgagtgatgaagtgcgcttgcgc
cgcattatcaaccagccaaagcgcagcatcggcgacaaaacgctggcggttgcgtctgaa
attgccgggcagattggtgaaagcgtgttttatgtgattgcccatgcggatgagtttgag
ccgcttaaacgcacagcgccaaaattgctgcagtttgcggaaattatgcagggctttatg
gaaatcaatgaaaatgaagaccgcagcgtcaaggaactgtatgatgaaatcctctctaaa
accggctatattgctagcctcggcaacgcgcagagtgatgaagtgaaagaccgtgtcgcc
aacctgacgcagctgggcaccaacattcagcagtacgaggaagaaaacgatgaggcggcc
agtctggacggcttcctggaggaagtggcgctgatgaccgatatcgacaattacgacggt
gacgcggacacggttgtgatgatgaccatgcactccgcaaagggactggaatttccggtt
gtgttcctgccgggctttgaagacggcatttttccgggtgtgcaggcaatttatgatccg
gtgcagattgaggaagagcgtcgccttgcgtacgtggcaatcacccgtgcgcgtgaggaa
ctgtgtgtgacaaatgcacagagccgcacactgtttggctcgaccaaccgcaaccgcccc
agtcgctttttagaagagattccggaggaactgacggagcacaccgcggcgcgcagctgg
aagcagccgaagcccggcgtggcacttccggtttccgccaaggaagtgcgcgcggccgcc
atggagtctgcgctgcattttggggcgccggaatctgtgcaggcacagaaggcccccaac
tttaaacccggcgatgccgtcttgcatcgtgcattcggcaagggcatggtgttgtcggca
acgccgatgggaaatgatacgctgctggaaattgcctttgacagcaagggtaccaaaaaa
attatggcgaacttcgcgcatttgaagcgcgcctga
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