Caproicibacterium argilliputei: PXC00_04265
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Entry
PXC00_04265 CDS
T09713
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
carl
Caproicibacterium argilliputei
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
dCache_1
GGDEF_2
Gar1
Motif
Other DBs
NCBI-ProteinID:
WOC33101
UniProt:
A0AA97DA51
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Position
complement(892435..894786)
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AA seq
783 aa
AA seq
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MKISKLQACKRFLKSYCSKILLFVLVPAISVLIYAALQNQLFLLFFEKEISNHYETIIQN
ISGTVDDNMKEILESTILFNSSDDFNEVYYSSQPYQKENQSQIGNVINLFGRYQASQSYV
DSVFILQKSYRMIINSSGTFPYDDFFNKMYAYQNYPQDFWMHYKNQFDYNILSNTVVHRG
SDAAFEIIPIIDNSLEKSHSHNLLVINLKVSEIEKLLSHSKPTTHSSLFILNAQKQTIAK
TDDSASAQEMQKLLASLSGKSTVETRTFSGKNYLLIAVNNPHSTSTAFTYIAMIPVADIH
QNSARVRMISILGILICMVISVCFSVFGVRKLYHPIKQLTVLFKVKQQKPEGWRAGPPVD
EIQFLGNHILDILEDNEELSKSMVLAVPYINEHLLFHLLNHNLSVKEGSTEFPFLPQINA
LFPNPFFEVAVIRYSFKDDFYQHYTDEQRVKIDRQLCNIIKKNLPLPYPYFTVKLKQTVF
AAVINVLTPGCEEEMAHCLSQFAALFQKDEAFISIRIALGRTYADIINISQSYNEALRAF
PFLSEFNPEKVALFRPEGHKASYQYSSEEENRLYNYLFSNQFDKVTSLVETIVTRNLQNH
VSENALKQIYIQIYNTISRVLAEKNLDIQTVMRKKYVDLLQEFPQLRADEISDYLNAVMQ
RLKSRADSCENKLDISQIKAYIDHNYTKDLYLDSLAEKFMTNPKYISKWLKKALGIPFKQ
YVTNLRIQKAKELLTETSKTIDQIAEEVGFNNRNPFVRAFKLSEGITPTEYRKERHSRTN
QRI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatatccaaattgcaggcgtgcaaacgttttttgaaaagctactgttcaaaaatt
ctgttgtttgtcttggtcccggcaatttccgtgctcatttacgccgccctgcaaaaccag
ctttttctgctgttttttgagaaggaaatatccaaccactatgaaacaatcattcaaaat
atctccggaacggtagatgacaatatgaaagaaattttagagtctaccattctattcaat
tcctccgatgatttcaatgaagtctactacagttcccagccctaccaaaaagaaaatcaa
tctcaaatcggcaacgtcatcaatctgttcggcagatatcaggcatctcagagctatgtg
gacagcgtttttattctgcagaaatcctaccgcatgatcatcaactccagcggtactttt
ccctatgacgactttttcaacaaaatgtatgcctatcaaaactatccgcaagacttctgg
atgcattacaaaaaccagtttgactacaatattctttccaatacagttgtacacagagga
agcgatgccgcctttgaaatcatcccaattattgacaacagcttagaaaaaagccactct
cacaatctgctagtcatcaacctaaaagtcagcgaaattgaaaaactgctgagtcacagc
aagccaaccacccacagcagtttgttcattttaaatgcacaaaagcaaacaatcgccaaa
accgatgattcggcctccgctcaagaaatgcaaaagctgctggcctctctgtccggaaaa
agcaccgtggaaacacgcacattttccggaaaaaattatctgctgattgctgtaaacaac
ccccatagcacttcgactgcttttacttatatcgcaatgattccggtggcagatattcat
caaaattccgcacgagttcgaatgatctccattctaggcatccttatttgtatggtaatc
agcgtatgcttttctgtgttcggtgtacggaagctgtaccatcctatcaagcagctaacc
gttttatttaaggtgaaacagcaaaaaccggaggggtggcgtgccggccctccggttgat
gaaattcagtttctcggtaatcatattttagatattttggaagacaacgaagaactgtca
aaatccatggtactggccgttccgtacatcaatgaacatctcctgtttcacttgctcaat
cataatctttcggtaaaagagggaagcacagaatttccatttttgccacagatcaacgcc
ttgtttcccaatccattttttgaagttgcggtcattcgttattctttcaaagatgatttc
taccagcattatacagatgagcagcgcgtcaaaattgaccggcaattgtgcaatatcatt
aagaaaaaccttcctttaccctatccctactttactgttaagctgaagcaaaccgttttt
gccgccgtaattaatgtgctgactccgggttgtgaggaagaaatggcgcactgcctctct
cagtttgcagcgttgtttcaaaaagatgaagcgttcatcagcattcgcattgctcttggc
cgcacctatgctgatatcataaatatcagccaatcctataacgaggctttgcgggctttt
ccgttcctttcggaattcaacccggaaaaagtcgctcttttcagaccggaaggccacaaa
gcttcctatcagtactcttcagaagaggaaaaccgactgtacaattatttattctccaat
cagtttgacaaagttacttctctggttgaaaccatcgtcactcgcaatctgcagaaccac
gtttctgaaaatgctttaaagcagatttatattcagatttacaacaccatcagccgcgta
ctcgccgaaaagaacctggacattcaaaccgtcatgcgaaaaaagtatgtggaccttttg
caggaatttccgcagctgcgtgccgatgaaatcagtgactacctaaacgcagtgatgcag
cgcttgaaatctcgtgcagactcttgtgaaaacaaactggatatttcacaaatcaaagca
tacatcgaccacaactacacaaaggatctgtacttagacagccttgccgaaaaatttatg
acaaatccgaagtatatttctaaatggctaaaaaaagcactcggcattccgtttaagcag
tatgtaaccaacctgcggattcaaaaagcaaaagaactgctcaccgaaacgtccaaaaca
attgatcaaattgcagaggaagtcggattcaacaacagaaatccctttgttcgcgctttc
aaactcagcgaaggaattacgcccacggagtaccgcaaagagcggcacagccgcaccaac
cagagaatctga
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