Caproicibacterium argilliputei: PXC00_05565
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Entry
PXC00_05565 CDS
T09713
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
carl
Caproicibacterium argilliputei
Pathway
carl00300
Lysine biosynthesis
carl00470
D-Amino acid metabolism
carl01100
Metabolic pathways
carl01110
Biosynthesis of secondary metabolites
carl01120
Microbial metabolism in diverse environments
carl01230
Biosynthesis of amino acids
Module
carl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
carl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PXC00_05565 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PXC00_05565 (dapF)
Enzymes [BR:
carl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PXC00_05565 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF7356
Motif
Other DBs
NCBI-ProteinID:
WOC33337
UniProt:
A0AA97DD29
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All DBs
Position
1165842..1166675
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AA seq
277 aa
AA seq
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MKFTKMQGIGNDYIYINCFQEKVENPSELSVRLSDRRFGIGSDGIILIKPSSKADCEMDI
YNADGSRAMMCGNGIRCVGKYVYDRGICRKNPLRVDTQSGVKTLYLHVENGAVQTVRVDM
GAPILAPAEIPVTLPGERAVNVPYTVSGREEHITCVSMGNPHCVLFVEDVDALNLEKIGP
AFEHAPIFPQRVNTEFIQVLSDREVRMRVWERGSGETWACGTGACAAAVACALNGKTGRK
VLLHLRGGDLTVTWEETSGTVFMEGPAAFVFDGTVDV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacaaagatgcagggaatcggcaacgattacatctacatcaactgcttccag
gaaaaagtggaaaacccatccgagctgagcgtacggttgagcgaccgccgcttcggaatc
ggttcggacggcatcattttgattaaaccgagcagcaaagcagactgcgagatggacatt
tataacgcggacggttcccgtgccatgatgtgcggaaacggcatccgatgcgtcggcaaa
tatgtttatgatcgcggcatttgcaggaaaaatcctctgcgtgtcgatacccagagcggc
gtgaaaacgctgtacctgcacgtcgaaaacggcgcggtacagaccgtgcgtgtggacatg
ggagcaccgattcttgcgcctgcggaaattccggtgacgctgccgggcgaacgtgcggtg
aacgtgccgtacacagtcagtggcagggaagagcacatcacctgcgtttccatgggaaac
ccgcactgcgtgctttttgtggaagatgtagatgcgctgaatttggagaaaatcggcccg
gcgtttgagcacgcgccgatttttccgcagcgtgtcaatacggaatttattcaggtgctc
agtgaccgggaagtcaggatgcgcgtctgggagcgcggctcaggagaaacctgggcgtgc
ggcaccggcgcttgcgcggcggcggtggcctgcgcgctgaacggaaagaccggacggaag
gttttgctgcacctgcgcggcggggatttgaccgtcacttgggaggaaacctccggaacg
gtctttatggaaggcccggcggcattcgtctttgacggtacagtggatgtgtga
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