Caproicibacterium argilliputei: PXC00_06965
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Entry
PXC00_06965 CDS
T09713
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
carl
Caproicibacterium argilliputei
Pathway
carl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
carl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PXC00_06965 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carl03400
]
PXC00_06965 (uvrA)
DNA repair and recombination proteins [BR:
carl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXC00_06965 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PXC00_06965 (uvrA)
BRITE hierarchy
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_21
RsgA_GTPase
AAA_29
nSTAND1
nSTAND3
AAA_22
DnaJ_CXXCXGXG
APS_kinase
AAA_15
AAA_33
AAA_23
AAA_24
MMR_HSR1
NACHT
cobW
Viral_helicase1
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
WOC33602
UniProt:
A0AA97H3V6
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All DBs
Position
1436382..1439222
Genome browser
AA seq
946 aa
AA seq
DB search
MPSKNIFIKGAREHNLKNIDLEIPRDKLIVFTGLSGSGKSSLAFDTIYAEGQRRYMESLS
SYARQFLGQMEKPDVDYIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGVP
HCPVCGRVIEQQTIDQIVDQVMTLPQKTKIQILAPVVRARKGTHAKEFEAARKSGFVRAR
VDGILYDLSEKIELEKNKKHTIEIVVDRLIVKEDIRSRLADSIETAASLTGGILVVSPAG
QEDILFSQNYACPEHGLGVEELSPQMFSFNNPVGACSKCTGLGVFMKIDPDLILPDKSLS
IRKGGVKGGGWAMEGSTIAAMYMKGLSKHYHFSLETPIGDLPPEIIDIILYGTKGEKIEV
ERSNGFSTNRYQTIFEGVINNLERRFHETSSNWIKEEIESYMSAIPCDACHGKRLNPMSL
AVTVGEKNIADFCSLSVVQALDFLDKLELTGRNAVIAKPILKEIRSRLGFLKSVGLGYLT
LARSAGTLSGGESQRIRLATQIGSSLMGVVYILDEPSIGLHQRDNDKLLATLKHLRDQGN
TVIVVEHDEDTMRAADHIVDIGPGAGVHGGEVVFNGTPAEIVNCEASITGQYLSGRRRVE
VPAVRRTGNRKSLKIIGASQNNLKNINVNIPLGKFVCITGVSGSGKSSLINEILYKYLAA
QLNGAKTHPGKFKEIRGLSELDKVIQIDQSPIGRTPRSNPATYTGVFTDIRNLYASTQDA
KLRGYTSGRFSFNVKGGRCEACEGDGIIKIEMHFLPDIYVPCDVCHGKRYNRETLEIKYK
GKSIYDVLEMTVEEGVEFFSAIPRIARRLQTLQDVGLGYVKIGQPATTLSGGEAQRVKLA
AELSKRPTGRTIYILDEPTTGLHIADVHKLIEVLQKLVDNGNTVVVIEHNLDLIKTADWI
IDLGPEGGDAGGTILAQGTPEQVAEVEASYTGQYLRRLLPSCRESD
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaaaaatatttttatcaagggtgccagagaacacaacctgaaaaatattgat
ttggaaattccgcgtgataagctgattgttttcaccggcctttccggttcagggaaaagc
agccttgcttttgatacgatctatgcggaagggcagcgccgctacatggagtccctttct
tcctatgcgcgccagtttctcggtcagatggaaaagccggatgtggattatattgaagga
ctttctccggcgatttctattgaccagaaaaccacctctaaaaatccacgttccacagtg
ggcactgttacggaaatctacgactacctgcggctgctgtacgcacgtgtcggcgtgccg
cactgcccggtctgcgggcgtgtcattgagcagcagaccattgaccagattgtagaccag
gttatgacgctgccgcaaaaaacgaaaattcaaattttggcgccagtcgtgcgcgcacgc
aagggaacccacgcaaaagagtttgaggcagcacgaaaaagcggatttgtccgtgcacgg
gtagatggaattctgtatgacctttcggaaaaaattgaactggagaaaaacaaaaaacac
accattgaaattgtcgtggaccgtctgattgtcaaagaggacatccgctcccgtctggca
gacagcatcgaaacggctgcttctctgactggcggtatattggttgtcagtccggctggg
caagaggatatcctcttcagccagaactacgcttgcccagaacacggcttgggcgtagag
gaactcagcccgcagatgttttcctttaataatccggtgggcgcgtgttccaaatgcacg
ggcttaggcgtattcatgaaaatcgatccggatctgattctgccggacaaatcgctcagc
atccgaaaaggcggtgtcaaaggcggcggctgggccatggagggcagcacgattgctgcc
atgtatatgaaagggctgtcaaagcactatcatttttccttggaaacgcctattggggat
ctgccgccggaaattatcgacatcatcctgtatggcacaaaaggagaaaagattgaggtt
gagcgttcaaatgggttcagtacgaaccgctaccaaaccatttttgaaggcgtcatcaac
aatctggagcgccgcttccacgaaacttcaagcaattggattaaagaagaaattgaatcc
tatatgagcgccattccctgtgatgcctgccatgggaagcggctgaatcccatgagcctt
gcggtcacagttggggagaagaacattgcggatttctgcagcctttccgtggtacaggcg
ctggactttctggataagttggagctgaccggccgcaacgcggtaattgcaaagccgatt
ttaaaagaaatccgttcccgcttgggctttctgaaaagcgtggggctgggatatttgacg
cttgcgcgttctgccggcacgctttccggcggagagagtcagcgaatccgtctggcaaca
caaatcggttcttcgctgatgggggttgtgtatattctggacgaaccgagcatcggtctg
caccagcgtgacaatgacaaattgctcgccacgctcaagcacctgcgcgaccagggaaac
accgtaattgtcgtggagcacgatgaagatactatgcgtgcggctgaccacattgtagat
atcggcccgggcgccggtgtgcacggcggcgaagtggtgtttaacggcacgcctgccgaa
attgtaaactgcgaggcttccattaccgggcagtatctaagcggcagacgccgcgtagaa
gtgcctgccgtgcgcagaaccggcaacagaaagtctctgaaaattatcggtgcatcgcaa
aacaatctgaaaaatatcaatgtgaatattcctttggggaaattcgtctgcatcaccggt
gtttccggttccggaaaatcctcgctgattaacgaaatcctttataaatatctggcggca
cagctgaacggagccaaaacgcatcccggaaaatttaaggaaatccgtgggctgtccgaa
cttgacaaagtgattcagatcgaccagagtccgattggtcgcacaccgcgttccaatccc
gccacgtacaccggtgtttttacagatattcgcaatctgtatgccagtacgcaagacgcg
aaactgcgtggctacacatccggccgtttttctttcaatgtcaagggcgggcggtgtgaa
gcttgcgaaggtgacggcatcattaaaatcgaaatgcattttcttccggatatttacgta
ccatgcgatgtctgccatggaaagcgatacaaccgagagacactcgaaatcaagtacaaa
gggaaatctatttacgatgttctggaaatgaccgtagaggaaggcgtggagtttttcagc
gcaattccacgcattgcccgccggctgcaaaccctgcaggacgttggacttggttatgta
aaaattggccagcctgccacaacgctttccggtggagaagcgcaacgggtcaagctggca
gcggaactgagtaagcgtccaaccggtcgaactatttatattctggacgaaccgacaacc
ggtctgcacatcgccgatgtgcacaaactcattgaagttttgcaaaaactcgtagacaac
ggaaacaccgtggtggtcattgagcacaatctggacttaattaaaacagccgactggatt
attgatcttggcccggagggcggcgatgccggcggtaccattctggcacagggaacaccg
gagcaggtagccgaagtagaagcttcctacaccgggcagtacctgcggcgtctgctgccg
tcctgcagggagtccgactaa
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