Caproicibacterium argilliputei: PXC00_12790
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Entry
PXC00_12790 CDS
T09713
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
carl
Caproicibacterium argilliputei
Pathway
carl03030
DNA replication
carl03410
Base excision repair
carl03420
Nucleotide excision repair
carl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXC00_12790 (polA)
03410 Base excision repair
PXC00_12790 (polA)
03420 Nucleotide excision repair
PXC00_12790 (polA)
03440 Homologous recombination
PXC00_12790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carl03032
]
PXC00_12790 (polA)
03400 DNA repair and recombination proteins [BR:
carl03400
]
PXC00_12790 (polA)
Enzymes [BR:
carl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXC00_12790 (polA)
DNA replication proteins [BR:
carl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PXC00_12790 (polA)
DNA repair and recombination proteins [BR:
carl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PXC00_12790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PXC00_12790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WOC32054
UniProt:
A0AA97DA05
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All DBs
Position
2661518..2664130
Genome browser
AA seq
870 aa
AA seq
DB search
MKLLVLDGNSILNRAFYGIKLLTTKDGLYTNGIYGFLTMLQKLEGEVQPDAVAIAFDLKA
PTFRHKRYAGYKSNRHGMPEELAQQLPNLKELLTLLGYRLVTCEGYEADDILGTLGRACT
EHRDTCVIATGDRDSLQLVGPYVSVRLATTKYGQPQVTLYDETRIREDYGVTPREMIEIK
ALQGDSSDCIPGVRGIGPKGAGDLIQKYHSIDYLYAHLDELDIRENLRQKLRDGKESAYL
SQELGTICTTAPIDDDPAHYVKAPAKQAEAAALMRRLEFFKLLEKMDWGSVPAPAAETAE
ETPAAVHLYLHPDIDALCAALQKDGSICLLGDFSGRELQRLSVAQGGNAYLLEDPAAWKR
VFALSLPCFTYDSKPLFAAAAAAGAQLNLAQDALLAAYLLNATASGYDYARLCQEYGVPL
AEDVSMENVQPEDLLRADTLSGCARVCALPQLCKTLAAKIEDSGETPLLRDIEQPLARVL
SHMEQTGFAVDRAGIAAYGTKLEQQVQAFQKEIWEQTGYEFNLNSPKQLGEALFDKLGLP
HGKKTKSGWSTSAAVLENLRYDHPVVEMILQYRTVSKLKSTYCDGLLKVIAPDGRIHSSF
NQTETRTGRISSTEPNLQNIPVRTDLGRELRRFFVAKPGCVLIDADYSQIELRVLAHVAN
DQNMIAAFQSGADIHRTTAAQVFHMPEEMVTPLMRSRAKAVNFGIVYGIGAFSLSKQLHI
ARQEADSYIKDYLQHYSGINDYMQRVVAEAKEKGYAETMFGRRRYLPELSSSNFNLRSFG
ERVARNMPIQGAAADIIKIAMIHVEDRLQKEGLAARLILQVHDELIVEAPEAEAETAAVL
LQEEMEHAVALAVPLTADAKSGKTWYEAKA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactcgtcctggacggcaacagcattctgaaccgtgccttttacggcattaag
ctccttacaaccaaggacggtctgtacaccaacggcatttacggctttctgaccatgctg
cagaagctggagggcgaagtgcagcccgatgcggtcgccatcgcgtttgacctgaaggca
cccaccttccgccacaagcgctacgccggctacaaatccaaccgtcacggtatgccggag
gaactagcccagcagctgcccaatctcaaggagctgctaacgctgctcggataccggctg
gtcacctgcgaggggtacgaagcagacgacattctcggcacgcttgggcgcgcctgtacg
gagcatcgcgacacctgtgtcattgccactggggaccgcgacagcctgcaactggtcggg
ccttacgtttccgtgcgtctggcaaccaccaaatacgggcagccgcaggtcacgctgtat
gatgaaacgcgcattcgtgaggactatggtgtcacaccaagggaaatgattgaaatcaag
gccctgcagggcgactcctccgactgtattcccggcgtgcgcggcatcggccccaaaggc
gcgggagatctgattcagaaatatcactcgattgattatctgtatgcgcacctggacgaa
ctggacatccgcgaaaacctgcggcagaagctgcgcgacggcaaagaaagcgcttacctt
tcgcaggagctcggcaccatctgcaccaccgcaccgattgatgacgaccctgcgcattat
gtaaaggcacccgcgaagcaggcggaggccgccgcgctgatgcgccgcttggaattcttt
aaactgctggaaaagatggactggggcagtgtacccgcacctgccgctgaaactgccgaa
gaaacgcccgccgctgtgcacctgtatctgcatccggacatcgacgcgctgtgcgccgcg
ctgcaaaaggatggcagcatctgcctgctgggagatttttcaggacgcgagctgcagcgc
ctttccgttgcgcagggcggaaacgcctatctgctagaagaccctgccgcatggaaacgc
gttttcgcgctttcgctgccctgctttacctacgacagcaagccgctgtttgccgccgct
gcggcagccggcgcacagctgaaccttgcacaggatgcgctgctggcagcgtacctgctg
aacgcaaccgccagcggctacgactacgcacgcctatgtcaagaatatggggtgcccttg
gcagaggatgtttccatggaaaacgtccaaccggaagatctgctgcgtgctgacaccctg
agcggctgcgcccgcgtctgcgcactgccgcagctctgcaaaaccctggcggcaaaaatc
gaagattcgggtgaaaccccgcttctgcgggacatcgagcagccactggcacgcgttctc
tcgcacatggaacaaaccggctttgccgtggaccgcgccggcattgccgcctacggcacg
aagctggagcagcaggtgcaagcctttcagaaagaaatctgggaacagaccgggtatgaa
tttaacctgaacagtcccaagcagctgggcgaagcgctgtttgacaaactggggctgccg
cacggcaaaaagacaaaaagcggctggtccaccagcgccgctgtgctggaaaatctgcgg
tacgaccatccggttgtagaaatgattctgcagtaccgcacagtcagcaagctgaaatct
acctactgcgacggtctgctcaaggtcattgcgccggatgggcgcatccactccagcttt
aaccaaacggaaacgcgcaccgggcgcatcagctccactgagccgaacctgcagaacatt
ccggtacgcaccgaccttggccgtgagctgcgtcggttctttgttgccaaaccgggctgc
gtactgattgacgcggattattcgcagattgaactgcgcgtgctggcacacgttgcaaac
gaccaaaacatgattgctgcgttccaaagcggcgcggacattcaccgcacgaccgcagca
caggtgtttcatatgccagaggaaatggtcacgccgctgatgcgcagccgtgccaaagcc
gtcaacttcggcattgtatacggcattggcgctttttcgctttccaagcagctgcacatc
gcacggcaggaagcggattcctatatcaaggattacctgcagcattacagcggcattaac
gactatatgcagcgtgtggttgccgaggcaaaggaaaaaggctatgctgagaccatgttt
ggcaggcggcggtacctgccggaactttccagcagcaactttaacctgcgctcttttggc
gagcgcgtggcgcgcaatatgccgattcagggcgccgccgcagacatcattaaaattgcc
atgattcatgtggaagaccgcctgcagaaagaggggcttgccgcccggctgattctgcag
gtgcacgatgaattgattgtcgaagcgcccgaagcagaagccgaaactgccgcagtcctg
ctgcaggaggaaatggagcacgccgttgcgctggcagtgccgctgaccgccgatgcaaag
tccggaaaaacctggtatgaggcgaaagcctga
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