Campylobacter armoricus: CARM_0858
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Entry
CARM_0858 CDS
T06909
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carm
Campylobacter armoricus
Pathway
carm03420
Nucleotide excision repair
carm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CARM_0858 (rep)
03430 Mismatch repair
CARM_0858 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carm03400
]
CARM_0858 (rep)
Enzymes [BR:
carm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CARM_0858 (rep)
DNA repair and recombination proteins [BR:
carm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CARM_0858 (rep)
MMR (mismatch excision repair)
Other MMR factors
CARM_0858 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
ResIII
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QKF79768
UniProt:
A0A7L5HKC6
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All DBs
Position
824411..826438
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AA seq
675 aa
AA seq
DB search
MPLSRLNEEQYKAASAPFGHNLIIASAGTGKTSTIVARIAFLLQNGIKPEKIMLLTFTNK
ASKEMIERLSRYFDKNITSKITAGTFHSTAYTLLKELNHDIILKPASELKILLRSIFEKR
TFHHLSDTKPYMSSYLYDVYSLFQNTNTNLDKFYNWFCQNYDEQAIYAEIYEDILKEYEE
EKSRFNYVDFNDLLIKLKQVLASHHFEFDEILVDEYQDTNTLQGSLIDAFKSKSLFCVGD
YDQSIYAFNGADISIIGSFKDRFVDANIFTLNKNYRSSKNILALANKVILNNERLYPKEL
IVTREGDFKTPSLLTFNELFDQYSTIAKIILQSGVDLDEIAVIFRNNSSADGVEVALREL
GIASKRKGGGSFFESLEVKNFCSMLAIALNPKDIMAFIHLLEYTKGVGGVLAKDIFDALL
KLGHSSLIKGFLDPDANVSLKKYKKQSYQLGLFDDIEELASPSRFNLESEFNTHPILSLP
KINELCAKNLEKIYLFIKKASECKISTQLVNLILENDYFKEICDILATKRATNKNSNVDL
NKKNEILEKIEAKMFVLKELAKNYSDNYKYYNFLTLGASEMSSGSGVNLLSIHASKGLEF
ELVFVIDLAQGRFPNQKLMSMGGSLEEERRLFYVAVTRAKDTLYLSYAKYDKIKKSNYQP
SCFLIEAGMCKEEIK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatctcgtttaaatgaagaacaatataaagccgctagtgccccttttggacat
aatttaatcatagcaagtgcaggaactggtaaaacttcaactatagttgcaagaatagca
tttttacttcaaaatggtataaagcctgaaaaaattatgcttttaacctttactaataaa
gctagcaaagagatgatagaaagacttagtagatattttgataaaaatatcacttcaaaa
attacagcaggaacctttcatagcacagcttataccttattgaaagaattaaatcatgat
attattttaaaacctgcaagcgagcttaaaattcttttgcgttccatttttgaaaaacgc
acttttcatcatttaagcgacaccaaaccttatatgtcaagctatttgtatgatgtgtat
tctttatttcaaaatactaatacaaatttagataaattttataattggttttgccaaaat
tatgatgaacaagctatctatgctgaaatttatgaagatattttaaaagaatacgaagag
gaaaaatcacgatttaattatgttgattttaatgatttacttataaaattaaaacaagtt
ttagcttcacatcattttgaatttgatgagattttagtagatgaatatcaagatactaat
accttacaaggttctctcattgatgcttttaaaagcaaaagtctattttgtgtaggagat
tatgatcaaagtatttatgcttttaatggagctgatatttctatcataggaagttttaag
gatagatttgttgatgcaaatatttttactttaaataaaaattatcgctctagtaaaaac
atacttgcactggctaataaggtgattttaaacaatgaaagattatatcctaaggaatta
attgtaaccagagaaggagattttaaaacaccgagcttattaacctttaatgaattattt
gatcaatactctaccattgcaaaaataatcttacaaagcggagttgatcttgatgaaatt
gcggttatttttagaaacaactcaagtgctgatggagtagaagtagccttaagagaactt
ggtatagcaagcaaaagaaaaggtggcggaagtttttttgaaagtttagaggtaaaaaac
ttttgttctatgcttgcaattgcacttaatccaaaagatattatggcttttatacattta
cttgaatacaccaaaggggttggtggagttttggcaaaagatattttcgatgctttgtta
aaacttgggcattctagtttgattaaaggttttttagaccctgatgctaatgtaagttta
aaaaaatacaaaaagcaaagttatcaactagggctttttgatgatattgaagaactagct
tctccctcaaggtttaacctagaaagtgaatttaatacccatcctattttaagcctacct
aaaatcaatgagctttgtgcgaaaaatcttgaaaaaatttatctttttataaaaaaggca
agtgaatgcaaaatttcaactcaacttgtgaatttaattttagaaaatgattatttcaaa
gaaatttgtgatattttagcaaccaaaagagcgactaataaaaattccaatgttgattta
aataaaaaaaatgaaattttggaaaaaatcgaagctaaaatgtttgtattaaaagagctt
gcaaaaaattatagtgataattataaatactataatttcttaactcttggagctagtgaa
atgagtagtggtagtggggttaatcttttaagcatacatgctagcaagggtcttgagttt
gaacttgtatttgtaattgatcttgcacaaggaagatttcctaatcaaaagcttatgagt
atgggtggaagtttagaagaagaaagaagacttttttatgtagcagtaactagagctaaa
gatactttgtatttaagttatgcaaaatatgacaagataaaaaagagcaattatcagcct
tcatgttttttaatcgaagctggtatgtgtaaagaagaaataaaataa
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