Campylobacter armoricus: CARM_1072
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Entry
CARM_1072 CDS
T06909
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carm
Campylobacter armoricus
Pathway
carm03420
Nucleotide excision repair
carm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CARM_1072
03430 Mismatch repair
CARM_1072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carm03400
]
CARM_1072
Enzymes [BR:
carm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CARM_1072
DNA repair and recombination proteins [BR:
carm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CARM_1072
MMR (mismatch excision repair)
Other MMR factors
CARM_1072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QKF79975
UniProt:
A0A7L5HLE9
LinkDB
All DBs
Position
1049557..1051620
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AA seq
687 aa
AA seq
DB search
MSFFEDLNDSQKEAIMHIDGAMLILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAANVMKTRALALLQNQSLHNPLLCTFHKFGLLFLRLYSERISRANNFVIIDTDDKKKI
LKDLASENLKSSLASIGAYISNFKNQSKSAEEIRKELDFLKDEKNKNYEEIIHIYEQYEH
FLKQNNFMDFDDLLMLTNKILEDENFAKEQSQKYNYITVDEYQDTNTLQYQILKKLCSAH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFHNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDKGEEITILQNDDEKIESFKVAREVSKLLNSGINPGEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCVLQGSGFFSKKTDNEIEKFILSMHKIKEKNNLLAMILA
LEDEFKIKEFYKDNPEGEDKLLNIDELYANLKDKISHGNYNSLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDHVFIIGLEEGFFPLTSDTSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVMKKELTLDYQRNSYKKGDLIKHKIFGIGRVTSVSK
IGNEEKLTINFGGIERMIMSSFVEKAI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttgaagatttaaacgatagccaaaaagaagctattatgcacattgatggg
gctatgcttatactagcaggtgcaggcagtggaaaaactaaaaccattaccactagactt
gcttatttgattgatcatgtgggcattcctgcgcaaaatacccttacactaacctttaca
aacaaagctgctaatgtaatgaagacaagagccttggctcttttacaaaatcaaagtttg
cataatccgcttttatgtacttttcacaaatttggcttattgtttttaagattatatagt
gaaagaatttcaagggcaaataattttgtcattattgatacagatgataaaaagaaaatt
ttaaaagatttagctagtgaaaatttaaaaagctcattagctagtatcggagcttatatt
tcaaattttaaaaatcaaagtaaaagtgctgaagaaattcgcaaagaattagacttttta
aaagatgaaaaaaataaaaattatgaagaaatcattcatatttatgagcaatatgaacat
tttttaaagcaaaataattttatggattttgatgatttactaatgcttactaataaaatt
ttagaagatgaaaattttgccaaagagcaaagccaaaaatataattacattacagtagat
gagtatcaagatactaatactttgcaatatcaaattctaaaaaaactttgctcagctcat
gaaaatatctgcgtagtgggtgatgatgatcaaagcatttatggatggcgtggggctaag
atagaaaatatcttaaattttaaagagcaatttcataatgtaaaactagtcaaactagag
caaaattaccgctcaacaagcgctattttgcaagctgcaaatgaacttatagagcataat
agaaaaagattaggaaaaactttaatctgcaccaaagataagggtgaagaaataacaatt
ttacaaaatgatgatgaaaaaattgaaagttttaaggttgctagagaggtttcaaagctt
ttaaattcaggaattaatcctggtgaaatagccatactttatagagtaaatgcactatct
cgcgctcttgaagaagcttttagtaaagaaaaaattccttttaagttactaagcggaatt
cgtttttatgaaagagctgaaattaaagatattatttcatatttaagattgctttcaaat
ttaaatgatgattattcttttaaacgcatcattaatcgtcctaaaagaaattttggcaac
gcgagtttagaaaaattagaaaactacgctaaagaaaaccatttatctttatttgaaagc
ttatgtgttttacaaggaagtggattttttagcaaaaaaacagataatgaaatagaaaaa
tttatattaagtatgcataaaatcaaagaaaaaaataatttacttgcaatgattttagct
ttagaagatgagtttaaaataaaagaattctataaagacaatccagaaggcgaagataag
cttttaaacatagatgaactttatgcaaatttaaaagataaaatttcccatggaaactat
aatagtttagacgatattttgaatgaaatttcattattaaacgaacaagatggacttgat
aaagaaagtatttgcattatgagtattcacgctagcaaaggacttgaatttgatcatgtt
tttattataggcttagaagaaggattttttccattaactagcgacacaagcaatatagaa
gaagaacgcagacttgcttatgtagctattacaagagcaaagaaaaagctttatttaagt
tatgcaaattctagattttataaagggagtcgcacaagattagaaaaaagtagatttttt
ggcgaaagcaatgtaatgaaaaaagaactaacactagattatcaaagaaattcttacaaa
aaaggggatttaattaaacataaaatttttggtataggcagggttactagtgtaagtaaa
ataggaaatgaagaaaaactcaccattaattttggaggcatagagagaatgataatgtca
agttttgtggaaaaagctatatga
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