Carnobacterium sp. PL17GRE32: FPV25_00040
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Entry
FPV25_00040 CDS
T06316
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03030
DNA replication
carn03430
Mismatch repair
carn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPV25_00040
03430 Mismatch repair
FPV25_00040
03440 Homologous recombination
FPV25_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carn03032
]
FPV25_00040
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_00040
Enzymes [BR:
carn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPV25_00040
DNA replication proteins [BR:
carn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPV25_00040
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPV25_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QEM53416
LinkDB
All DBs
Position
6389..7333
Genome browser
AA seq
314 aa
AA seq
DB search
MAYNRRSGQQRPHMGKSIIGFPKDYVMIDIETTGLKPSNEEILELSAIRIRDHQMDRTFS
TLVQPNRPISGFITNLTGISNHMVMTAPPIEQAMPEFLDFIQEDIILGYNVNFDLGFIYD
TSVNLYNFPVKNDYLDVLTIARKLVTGTPNHKLGTMAQFYGISYEGAHRGLTDCYITVEL
YNQLFNQAKQVYQSEQDFKNAFYRGSYPKQIKVEDLEAETTDFNPMHPLFNKTIVFSGDL
DNMSREEAMQSSLNKGAILGKSVTLKTDYLIVSQSDLNKQKKTSKFKKAEEYANRGEKIK
IISEKVFKQLLEME
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaatagaagatctggtcaacaacgaccgcatatgggcaagtcaatcatcggt
tttccaaaagattatgtcatgatcgatatcgaaacaaccggcttaaaaccaagtaacgaa
gaaattttagaattatcagctattcggattcgtgaccaccagatggaccggactttttca
accttggtccaacccaaccgaccaatttcaggatttatcaccaatttaactggcatatcc
aatcatatggtcatgaccgcaccgccaattgaacaggctatgcccgaattcttagatttc
atccaagaagatatcattttaggctacaacgtgaattttgacctaggttttatttatgat
acctcggtaaacctttataatttccctgtgaaaaatgactatttggacgtgctaaccatc
gcccgaaaattagtaacaggaacacccaaccataaattggggactatggcccaattctac
ggcatttcttacgagggcgctcaccggggattaacagactgctatatcacggtagaattg
tacaaccaactcttcaaccaagctaagcaagtctatcaaagtgaacaagactttaagaat
gctttctaccgtgggagctatccaaaacaaatcaaagtggaggacttagaggcagaaaca
actgattttaacccaatgcacccgctgtttaataagactatcgttttttcaggggaccta
gacaatatgtcccgggaagaagccatgcaatctagtttgaataagggggctattttaggt
aaatcagtgactcttaagacagattaccttattgtctcacaatctgatttaaataagcag
aagaaaacaagtaaatttaaaaaagctgaagaatacgctaatcgcggcgaaaaaattaaa
attatttcggaaaaagtctttaaacaactcttagaaatggagtag
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