Carnobacterium sp. PL17GRE32: FPV25_01045
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Entry
FPV25_01045 CDS
T06316
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPV25_01045 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_01045 (recO)
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FPV25_01045 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FPV25_01045 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DEK_C
ExoU_C
Motif
Other DBs
NCBI-ProteinID:
QEM53601
LinkDB
All DBs
Position
complement(234434..235234)
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AA seq
266 aa
AA seq
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MRKDHYARFDGIVLFTRKYKEKDLLIKIFTKEFGKRMFFIKNIQRQNNGLREIAFPYMRA
SFVGTINDKGFSFLNDTDDVLFPKATISNIQANAYAAYMTGLTDAAFEDFIEEDKVFNLL
WQGLGKIEAGVDPSVVANIFEIQLLPKFGVGPNFRSCAICGRDQGRFDYSMQYAGVLCEQ
HFHMDDRRLHWSPRASHFIRLFSQIPYDKLGQVDLQATTKTEIRQALDDLYEEYVGIHLK
SKHFISQMETFVNPLDDKREKKYDNS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagaccattacgcgcgtttcgatgggattgtcctttttacgcggaaatacaag
gaaaaagacctgctaattaaaatattcaccaaggaatttggtaagcggatgttcttcatt
aagaatattcaacggcagaataatggtttaagggaaattgcctttccctatatgcgagcc
tcttttgtgggaaccatcaacgataaaggtttttcctttcttaatgatacggacgatgtt
ctatttccaaaggcaacgatctcaaatatacaggccaatgcctatgcagcctacatgaca
gggttgaccgatgccgcctttgaagacttcattgaagaagacaaggtgtttaacctgctc
tggcaaggtctaggcaaaatagaagccggtgtcgatccgtcagtcgtggccaatatattt
gaaattcagttgctgccgaaattcggggtgggccctaactttaggtcatgtgctatttgt
ggccgtgatcaaggccgttttgactattccatgcaatatgctggcgttttatgcgaacaa
cattttcacatggatgataggcgtctccattggtcaccacgggcaagtcattttattcga
ctgtttagtcaaataccatatgacaaactaggtcaagtggacttacaggcgacaacaaaa
actgaaattcggcaagccttggatgatctttacgaagagtatgtagggatccacttaaaa
agtaagcattttatcagccagatggaaactttcgtcaatccgcttgacgacaaaagagaa
aaaaagtatgataatagctga
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