Carnobacterium sp. PL17GRE32: FPV25_01140
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Entry
FPV25_01140 CDS
T06316
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FPV25_01140 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carn01007
]
FPV25_01140 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carn03016
]
FPV25_01140 (aspS)
03029 Mitochondrial biogenesis [BR:
carn03029
]
FPV25_01140 (aspS)
Enzymes [BR:
carn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FPV25_01140 (aspS)
Amino acid related enzymes [BR:
carn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FPV25_01140 (aspS)
Transfer RNA biogenesis [BR:
carn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FPV25_01140 (aspS)
Prokaryotic type
Other AARSs
FPV25_01140 (aspS)
Mitochondrial biogenesis [BR:
carn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FPV25_01140 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QEM53619
LinkDB
All DBs
Position
complement(250984..252753)
Genome browser
AA seq
589 aa
AA seq
DB search
MQRSVYCGNVSNEFVGQTVTLKGWVQKRRDLGGVIFVDLRDREGIVQAVFNVENLGNQFV
EAERLRSEYVIEVTGEVVLRGEGLANPKIKTGDIEVMVSDLTILNISKTPPFPVEDDIDV
NDEIRMKYRYVDLRRPKMANNMKLRHQVVSTIHRYLDDQEFIEVETPYLTKSTPEGARDY
LVPSRVHPGEFYALPQSPQLFKQLLMSAGMDRYYQVVRCFRDEDLRGDRQPEFTQIDLET
TFLTQEEIRDLVEGMLKTVVKRTKNIDITENFPIITYDDAMARYGNDKPDTRFGLELVEI
SDIVDQYEFKVFNQAIEKGGIVKAINIKGVGDNYSRKDLDNLTPFASTYGAKGVAWIKVT
DEGLSGPIGKFFKDNPAPLMDRLQAETGDVLVFVADKESVVNQSLSEIRLKFGRELDLMD
KNQFNFLWVTNWPLLEYDEDTKRFNAMHHPFTMPNEEDVDKLAENPEDVYAQAYDIVLNG
YEIGGGSLRIYQKEMQMQMFKALGFTEESATSQFGFLLNALDYGFPPHGGLALGLDRLVM
LLAGEENIREVIAFPKNGRAFDPLTEAPSQVSEQQLEELSLSVTTIDFD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtagtgtgtattgtggaaatgtgtctaacgaattcgttggacaaactgtaaca
ttaaaagggtgggtacaaaaacgtcgtgacctaggtggggtaatctttgttgatttacgc
gaccgcgaaggtatcgttcaagctgtattcaacgttgaaaacttaggcaaccaatttgtt
gaagctgaacgtttacgttctgaatacgtgattgaggtaactggtgaagttgtgttacgt
ggtgaaggattggcgaacccgaaaattaaaacgggtgacattgaagtgatggtttctgat
ttaacaatcttaaacatttcaaaaacaccaccattcccagttgaagatgacattgatgta
aacgacgaaattcgtatgaaataccgttacgtagatttacgtcgtccaaaaatggcgaac
aacatgaaattacgtcatcaagtagtatcaacaatccatcgttacttagatgatcaagaa
tttatcgaagtagaaacaccttacttaacaaaatctacgccagagggtgcgcgtgattac
ttagtaccatctcgtgtacatccaggtgaattctatgcattaccgcaatcaccacaatta
ttcaaacaattgttgatgtctgcaggtatggaccgttactaccaagttgttcgttgtttc
cgtgatgaagatttacgtggagaccgtcaaccagaatttacgcaaatcgacttagaaaca
actttcttaacacaagaagaaattcgtgatttagtagaaggtatgttgaaaacagttgtg
aaacgtactaaaaacattgatatcactgaaaacttcccaatcattacttatgacgatgca
atggcccggtacggtaacgacaagccagatactcgttttggtttagaattagtggaaatt
tctgatatcgttgaccaatacgaattcaaagtattcaaccaagcaattgaaaaaggtggc
atcgttaaagctatcaatatcaaaggtgttggtgacaactactcgcgtaaagacttggac
aacttaacaccatttgcatctacatacggggctaaaggtgtggcttggatcaaagtcact
gacgaaggtttatctggtccaattggtaaattctttaaagacaatcctgcaccattaatg
gaccgtttacaggctgaaactggtgacgtcttagtgttcgttgcagataaagaatcagtt
gtaaaccaatcattatctgaaatccgtttgaaattcggtcgcgaattagacttaatggac
aaaaaccaattcaacttcctatgggtaacaaactggccgttgcttgagtatgatgaagat
acaaaacgtttcaacgcaatgcaccacccattcactatgcctaacgaggaagacgtggat
aaattagctgaaaacccagaagatgtgtacgcacaagcttacgatatcgttttaaatggt
tatgaaatcggtggtggatcattacgtatctaccaaaaagaaatgcaaatgcaaatgttc
aaagctttaggttttacagaagaatctgcaacttctcaatttggtttcctattaaatgca
ttagactacggtttcccaccacacggcggattagctttaggtctagaccgtttagtaatg
ttattagctggtgaagaaaacatccgtgaagtgattgccttccctaaaaatggtcgtgca
tttgacccactaacagaagcaccaagccaagtatcagaacaacaattagaagaattatca
ttatcagtcactacaattgattttgattaa
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