Carnobacterium sp. PL17GRE32: FPV25_02330
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Entry
FPV25_02330 CDS
T06316
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPV25_02330 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_02330 (uvrB)
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPV25_02330 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPV25_02330 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
UvrD-helicase
UB2H
Kinesin
AAA_22
AAA_16
Peripla_BP_6
AAA_7
AAA_11
AAA
Motif
Other DBs
NCBI-ProteinID:
QEM53844
UniProt:
A0A9W7VQZ8
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All DBs
Position
521980..523974
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AA seq
664 aa
AA seq
DB search
MMINQFDLVSEYEPNGDQPEAIRRIVEQVEAGDKAQVLLGGTGTGKTFTMANVIAQTNRP
TLVLAHNKTLAGQLYGELKDFFPNNAVEYFVSYYDYYQPEAYVPSSDSYIEKSASVNDEI
DKLRHSATSSILERRDTIVVASVSCIYGLVNPVEYRDHVISIRQGQTLSRDAFMRRLVEN
QYERNDIDFQRGTFRVRGDIVDVFLSSHDSSSIRVEFFGDEIDRIREVDALTGEVQSEVE
HYPIYPGTHFVVDHEQVEKSVKSIEAELEERLKELNDEGKLLEAQRLEQRTRYDIEMLLE
MGYCNGIENYSRHMDGRKPGEAPYTLLDFFPEDFLLMVDESHMTMPQVRGMYNGDKARKQ
VLIDHGFRLPSALDNRPLKLEEFEGKLNQTLFVSATPADYEVEKAGEDDIVEQIIRPTGL
LDPTVEVRPIEGQIDDIISEINDRIEREERVFITTLTKRMAEDLTDYLEEVGIKVKYLHS
DIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVTILDADKEGFLRNERSLIQT
IGRAARNQNGHVILYADGITDSMRRAMDETARRRAIQQAYNKEHGIVPQTIKKEIRDAIR
ITHVNSEEMSNSLTEQLRALKRDDREQALRNVELEMKQAAKDLNFEKAAELRDIIMELKA
EMKK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaaccaatttgatttagtttcggaatatgaaccgaatggggaccaaccggaa
gccatcagaagaattgtagaacaagtggaggctggcgataaggcgcaagtcttactaggt
ggtacggggactgggaagacttttaccatggccaatgtgatcgcccaaaccaaccgacca
actttggttctagcccataataaaacacttgcagggcagttatatggggagttgaaagat
ttcttcccgaataatgcggtggagtattttgtatcttactacgactactaccaaccggaa
gcatatgtgccgtcaagtgattcgtatattgaaaaatcagcgtccgtgaatgacgaaatt
gataagttacgccactctgcgacgtcttctattttggagcgacgggatacgattgtcgtt
gcctctgtttcgtgtatttatggtttggtgaacccagtcgagtaccgagaccatgtgata
tcaattagacaagggcaaacattatcccgcgatgcctttatgcgtcgtttagttgaaaat
caatatgaacgaaatgatatcgacttccagcgtgggactttccgtgtgcgcggggatatt
gtcgacgtattcttatcatctcatgattcttcatcgattcgagtggagttttttggtgat
gaaatcgaccgcattcgtgaagtggatgctttaacaggtgaggtccagtctgaagtagaa
cattatcccatttatccagggactcactttgtggtggaccatgaacaagtagaaaaatca
gttaaatcaattgaggctgaattagaagaacgtttgaaagagttgaatgatgaagggaag
ttgcttgaagcgcaacgtctagaacaacgtactcgctatgatatagaaatgcttcttgaa
atgggttattgtaacgggatcgaaaactactctcgtcatatggacgggcgtaaacctggg
gaagcgccatataccttgcttgatttcttcccagaagatttcttattaatggtggatgag
tcacatatgacaatgccacaggtgcgcggcatgtataatggagataaggctagaaaacaa
gttttaattgaccatggtttccgattaccttcagccttggataatcgaccattaaaatta
gaagagtttgaagggaaattaaaccagaccctattcgtatccgcaacaccggcggattat
gaagtagaaaaagcaggcgaagatgatattgtagaacaaatcattcgaccaaccggcctg
cttgatcctactgtggaagttcgtccaattgaaggtcaaattgatgacattattagtgag
attaatgaccgaattgaacgtgaagaacgggtatttatcaccactttaacgaaacgaatg
gcagaagacctgactgactacttggaagaagtgggcattaaggtaaaatatctgcattct
gatatcaagacgttagaacgtacagaaattattcgtgacttacgtctaggtgtattcgat
gtgttgattgggattaacttattgcgtgagggaatagatgtacctgaagtatccttggtc
acaatattagatgcggataaggaaggattcctgcgtaatgaacggtcgctgatccaaact
attgggcgggcagcacgtaatcaaaatgggcatgtaattctgtatgcagatggtataacc
gactctatgcgccgggcaatggatgaaacggcccggcgtcgtgctatccaacaagcttat
aacaaggaacatgggattgtaccgcaaacaatcaagaaagaaattcgtgatgctattcga
attacccacgtgaattctgaagaaatgagtaattccttaacagaacaactccgagctttg
aaacgggatgatagagaacaagctctacggaatgtggaattagaaatgaaacaagctgcc
aaggacttaaatttcgaaaaagcggctgaacttcgtgacattattatggaattaaaagca
gaaatgaagaaataa
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