Carnobacterium sp. PL17GRE32: FPV25_02615
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Entry
FPV25_02615 CDS
T06316
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPV25_02615 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_02615 (xth)
Enzymes [BR:
carn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FPV25_02615 (xth)
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FPV25_02615 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QEM55116
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Position
583581..584408
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AA seq
275 aa
AA seq
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MKLISWNIDSLNAALTGASPRAELSREVLKRIREHQPDVIAIQETKLSAKGPTKKHLELL
EANVPDYEIQWVSSVEPARKGYAGTMFLYKKNYTPEVTFPQIGAPTTMDYEGRMITLEFP
DFYVTNVYTPNAGSALARLEDRQAWDVQYANYLADLDAKKPVIACGDFNVAHTEIDLAHP
KNNHFSAGFTDEERAGFTNLLNRGFTDTFRHIHGDVEGVYTWWAQRVKTSKINNSGWRID
YWLVSDRIADKVQKSEMLDSGTRQDHTPILLEIDI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatttcatggaatattgattctctaaatgcggccttgactggtgcatctcct
cgtgcagaattatcacgtgaggttttaaagaggattcgtgaacatcaaccagatgtgatt
gcgattcaagaaactaaattgtctgcgaagggtcctacgaaaaagcaccttgagctattg
gaagcgaatgtaccagattatgagattcagtgggtgtctagtgttgagcctgcccgtaaa
ggttacgctggtaccatgttcttatataagaaaaactacacgccagaagtcactttcccg
caaattggggcaccaacgacgatggattacgaaggtcgtatgattacacttgaattccct
gatttctatgtaaccaatgtttatacaccaaatgcaggatctgctttggcacgtttagaa
gaccgccaagcttgggacgttcagtatgcaaactatttagcggacttggatgcgaagaaa
ccagtgattgcttgtggtgactttaatgtcgcacatacggaaattgacttggcacacccc
aaaaataatcatttttctgctggttttactgatgaagaacgtgctggctttaccaacttg
ttaaaccgcggtttcacagataccttccgtcatattcatggcgacgttgaaggcgtctat
acttggtgggctcaacgagtgaaaacaagtaaaatcaataactcgggatggcgcattgat
tattggttggtgagtgaccggattgcagacaaagtgcaaaaatctgagatgctagactct
ggtacgcgtcaagaccatacaccaattttgttagaaattgatatctag
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