Carnobacterium sp. PL17GRE32: FPV25_02935
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Entry
FPV25_02935 CDS
T06316
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03420
Nucleotide excision repair
carn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPV25_02935
03430 Mismatch repair
FPV25_02935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_02935
Enzymes [BR:
carn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPV25_02935
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPV25_02935
MMR (mismatch excision repair)
Other MMR factors
FPV25_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
SR-25
MIP-T3
Motif
Other DBs
NCBI-ProteinID:
QEM55121
UniProt:
A0A9W7S3T6
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All DBs
Position
663653..666214
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AA seq
853 aa
AA seq
DB search
MALNQFTKGLNDRQKEAVEHTEGPLLIMAGAGSGKTRVLTHRMAYILSEKDVNPWNILAI
TFTNKAAKEMKERVSALVGPDANDMWVSTFHAMCVRILRREAEAIGFTRSFTIADPSEQQ
TLIKRIIKELNLDKDKFSHKMLLGRISDAKNNLMLPDDYRQNYSGYIEDVVADVYERYQK
GLQAAQSFDFDDLIMYTVKLFDQQPDILKYYQQKFHYIHVDEYQDTNEAQYKLVKHLGGY
FHNVCVVGDADQSIYGWRGANMENILNFEKDYPKSTTILLEQNYRSTKNILQAANNVINK
NTYRKDKTLWTDNNQGELISYYRAQNERDESNYVIGKIKDAIKDQNKRYGDIAILYRTNA
QSRVMEENLVKANMPYRIVGGLKFYDRKEIKDILAYLRLLANPSDNLSFTRIINVPKRGI
GPGTLDKLNTFASQQGISLLQAATLVDHSPITGKGATNLKAFGKMMANLQTQREFLAIQD
LVEEILAQTGYLKDLENQKTLEADARIDNIHEFISVTQEFDKRWEAEQEDREQAAQIAAQ
EEADRPTELQEANLNQSDVNPGNNPLNPDGTFNLFDLEGIQAELDGVIDNNSAEDDALMG
FITDLSLVSDLDNQEIDQQGELTLMTLHAAKGLEFPIVFIIGMEEGMFPLARAAKEESEL
EEERRLAYVGITRAEEKLYLTNSLSRLLYGKYQSNPVSRFIAEIDDELLDDSENERSIFQ
PSGGSPSDLPFGGSSSSGFGSSSSSGATFAADYASKRKRASNTYERANAKSYYERKKEAK
RSVFDPVTANKDIKTVDGPVTWAIGDKAVHKKWGVGTVVKVSGTGNDQELDIAFPNQGIK
RLLSAFAPIEKQA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaatcaatttacgaaggggcttaatgatcgacaaaaggaagctgttgagcat
accgaggggccgctattaattatggctggtgctggtagtgggaaaacacgtgttttgact
caccgcatggcctatattttaagtgaaaaagatgtgaatccttggaatattttggcgatt
acatttaccaataaggctgctaaggaaatgaaagaacgtgtttcagctctagtaggcccg
gatgccaatgatatgtgggtatccacttttcacgctatgtgtgtacgtattttaagaaga
gaagctgaggcaattggttttacaaggtcctttaccatagctgatccatcagaacaacaa
acccttatcaaacgtattattaaagaattaaacttagataaggataaattctctcataaa
atgctgctagggcgtatctctgatgcgaagaataacttaatgctaccagatgactaccgt
caaaattattctggatatatagaagatgtagtggcagatgtatatgaacgataccagaaa
ggtcttcaagcagcgcaatctttcgacttcgacgatttaattatgtataccgttaaatta
tttgaccaacagccagatattctgaaatactaccaacaaaaatttcattatatccatgtg
gatgaatatcaagataccaacgaagcccaatataaattggtcaaacacctaggagggtac
ttccataatgtgtgtgtagtaggggatgctgaccagtctatttatgggtggcgtggtgcc
aatatggaaaatatcttgaacttcgaaaaggactatccaaaatcaaccactatcctattg
gaacaaaattatcggtctactaaaaatatcttgcaagcggccaataatgtcatcaataaa
aacacctatcgtaaggataagaccctttggactgataataaccagggtgaattgatttct
tattaccgggcgcaaaatgagcgtgacgagtccaactatgtcatcggtaaaattaaagat
gctatcaaagatcaaaacaagcgttacggggacattgccattctgtatagaaccaatgcc
cagtcccgtgtaatggaggagaatttggtcaaggccaacatgccttaccgaatcgttggc
ggtctaaaattctacgaccgcaaggaaattaaagacattctagcttacctacgtctactg
gccaatccgtctgataacctatcatttacgcgtattatcaacgtgcctaaacgtggtatt
ggaccaggaaccctagataaattaaacacattcgccagccagcaagggatttccctttta
caggcggcaaccctagtcgaccattcaccaatcactggtaaaggtgctacgaatttaaag
gctttcggcaaaatgatggccaatctccaaacgcaacgcgaattcttagccatccaagac
ttagtcgaggaaattttagcgcaaaccggctacttaaaggacttggaaaatcagaaaaca
cttgaagctgacgcccgcatcgacaatattcacgagttcatttcagtaacccaagagttc
gacaaacgttgggaagctgagcaagaagaccgcgaacaagcagcgcaaattgcggcccaa
gaagaagcggaccggccgacagaattacaagaagccaacctcaaccaaagtgacgtgaat
ccgggcaataacccactcaatccagatggtaccttcaatttattcgaccttgaagggatt
caagcagaacttgatggtgtgattgacaacaattcggctgaagatgatgccttgatgggc
tttatcacggatttatcattggtatcagatttagacaaccaagaaattgaccaacaaggg
gaattgaccttgatgactttacatgcggctaaaggacttgagttcccaattgttttcatt
attgggatggaagagggcatgttcccactagctcgtgcagctaaggaagagtcggaactt
gaagaggaacgacgacttgcttatgttggcattacccgagcggaagagaaattatactta
accaattcgttgtcgcgcttgctttacgggaaataccagtccaacccagtttcgcgattt
atcgcagaaattgatgatgaattattagacgacagcgaaaatgagcggtctattttccaa
ccatctggcggcagtccatcagatttaccatttggtggcagcagctcatcaggtttcggt
tcttcatcttcatcaggcgcaacttttgcggcagattatgccagcaaacgtaaacgagcg
tccaatacctatgaaagagccaatgccaagtcttactatgaacgcaagaaagaagcgaaa
cggtcagtatttgacccagttaccgctaataaagatattaaaacagtagatggtccagta
acctgggctatcggcgataaagccgtccacaaaaaatggggtgttgggacagttgtcaag
gtttcaggtactggcaatgaccaagagttagatattgctttccctaatcaagggatcaag
cgtctattatctgccttcgccccaattgagaaacaagcttaa
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