Carnobacterium sp. PL17GRE32: FPV25_04875
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Entry
FPV25_04875 CDS
T06316
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
carn
Carnobacterium sp. PL17GRE32
Pathway
carn03030
DNA replication
carn03410
Base excision repair
carn03420
Nucleotide excision repair
carn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPV25_04875 (polA)
03410 Base excision repair
FPV25_04875 (polA)
03420 Nucleotide excision repair
FPV25_04875 (polA)
03440 Homologous recombination
FPV25_04875 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carn03032
]
FPV25_04875 (polA)
03400 DNA repair and recombination proteins [BR:
carn03400
]
FPV25_04875 (polA)
Enzymes [BR:
carn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPV25_04875 (polA)
DNA replication proteins [BR:
carn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FPV25_04875 (polA)
DNA repair and recombination proteins [BR:
carn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FPV25_04875 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPV25_04875 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEM55141
UniProt:
A0A9W7S3W5
LinkDB
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Position
complement(1058596..1061319)
Genome browser
AA seq
907 aa
AA seq
DB search
MQVYSNEFQEATQLSTNKEKKKLVLFDGSSLAFRSFFAIHNIDSFVNKNGMHTNALFAFH
EMMNNILEKEQPTHALVAWDAGKTTFRNEFFDEYKGGRQSTPSEFREQMPFFNVLLDAFG
VAHYELTNYEADDIIGTFATKVDPEEFDVVVISGDKDLTQLARDNVRVDITKKGVSELAS
YTPASIMEDMGITPEQIIDMKGLMGDSSDNYPGVSGIGEKTALKLLHEYGSMEAMYEQID
DMKKSKRKENLINEKDNAILSKKLARIELDAPVKIELAELPYKGKQLEPLMSFYKDMNFN
GFMSRLLENSDQADLLTEDWEEVTYTHVASAEDLTVDHFPSVAAADGYTIYLENLSKNYH
DSEVVAVAWTNGSEIFTGDASLLQADLFKSWLSDEQVTKVVFDAKRTKVMLDYVGIDFAG
VMDDVLIGSYLLHARDNSNDLAEVAREFDMDDLSYDESIYGKGAKRGVPEEAETMYEHIA
RKVHIIARLQETIRPQLEANQMDDLYQRMELPLALVLANLEILGISVDKQQLVTMQAEFQ
EIIDGLEANIWKEAGHEFNVNSPKQLGVILFEEMGLPVIKKTKTGYSTAQDVLEKLAGQA
PIIDLILNYRQLNKLQSTYVEGLQEFIHEDGKIHSRFQQTLTSTGRLSSADPNLQNIPIR
SEEGRSIRKAFVPSHEDWVIFSSDYSQIELRVLAHISGDKHMQEAFNNQEDIHTSTAMKV
YNVAKEEVTSNMRRNAKAVNFGIVYGISDYGLSQNLNISRPEAKNFIDTYLENYPGVQAY
MKDVVEKAKEDGYVETLFNRRRYLPDLKSKNFNVRSFAERNAMNTPIQGTAADIIKIAMV
KMDEALKEHKLKANLLLQIHDELVFEVPKDEIDTLEKLVTEVMGSAAQLDVPLEIESNYG
ATWYEAK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtattccaacgaatttcaggaggcgactcaattgagtactaataaagaaaag
aagaagctcgtcctatttgacgggtcatctctggcttttcgttctttctttgccatccat
aatatcgattcattcgtaaacaagaatggtatgcataccaatgccttgtttgcttttcat
gaaatgatgaataatatcttggaaaaagaacagccgacgcatgccttggtggcgtgggac
gcaggtaaaacgacttttagaaacgaattctttgatgaatataaaggtgggcgtcaatca
acaccatctgagtttagagagcagatgccatttttcaatgtgctcctagatgcctttggg
gttgcgcattatgagttgactaactatgaggcagacgacattatcgggacttttgcgact
aaagtagaccctgaagaatttgatgttgtcgtgatttctggggacaaggatttgacgcaa
ttggcacgtgacaatgtccgagtagatatcaccaaaaaaggggtatctgaattagcatct
tatacgccagcttcgattatggaagatatggggattacgcctgaacaaatcattgatatg
aaggggttaatgggcgattcttcagataactaccctggtgtatcagggattggtgaaaag
acagccctaaaattattacatgaatatgggtcaatggaagcgatgtatgagcaaattgac
gatatgaagaaatcgaagcgtaaagaaaatctgatcaacgaaaaagacaatgcgattctg
tctaaaaagttggcgcggattgaactggacgcacccgtgaaaattgaattagctgagtta
ccttataaaggcaaacagcttgaaccgctgatgtcattttacaaggatatgaactttaat
ggctttatgtctcgtttattggaaaactcagaccaggcggacttgttgacagaagattgg
gaagaggttacctatacccatgtggcatctgctgaggatttaacagtggaccatttccca
agtgttgctgcagcggatgggtatacgatttaccttgaaaacttgagtaaaaactaccat
gattcagaggttgtggctgttgcatggacgaacggtagtgaaatctttactggagatgcc
agcttactacaggctgatttatttaaatcatggttgtcggatgagcaagtcacaaaagta
gtctttgatgccaaacgaacaaaggtcatgctggactatgtaggcatcgactttgcaggg
gttatggatgatgtcttaattgggtcgtatttattacatgcccgcgataactctaacgac
ttagctgaagtggcacgggaatttgatatggatgacttgtcttatgatgagtctatttat
ggcaaaggggctaaacgaggcgttcctgaagaagctgaaaccatgtacgaacatattgcc
cgtaaagtgcatattatcgcacgtttacaagaaaccattcgcccgcaattagaagccaac
caaatggatgacttgtaccaaagaatggagttaccattggctttagtattggcaaacctt
gaaattttagggatttcagtggataaacaacaattagtcactatgcaggctgaattccaa
gagattattgacggccttgaagccaatatctggaaagaagcaggccacgaattcaatgtg
aattcacctaagcaattaggggttatcctatttgaagaaatgggcttacctgtgattaag
aaaacgaagactggttattcaacagcccaggatgttttggaaaaattggctggccaagca
ccaattatcgacttgattttaaactaccgtcaattgaataaattgcaatcgacttatgtt
gaagggttacaagagtttatccacgaggatggtaaaattcactctcgtttccaacaaacc
ttaacatcaacaggtcgtttatcatcagctgatccaaacttacaaaatatcccaattcgt
tctgaagaaggccggagcattcgtaaagcctttgtgccaagtcacgaagactgggttatt
ttttcaagtgactactcacaaattgaattacgggtgctagcccatatttctggtgacaag
catatgcaggaagccttcaacaaccaagaagatatccatacttcaacagctatgaaagtc
tacaatgtggctaaagaagaggtaacgtctaacatgagacgaaatgccaaggcggtaaac
ttcgggattgtctatggaatttctgactatggtttgagccaaaacttgaatatctctcgc
ccagaagctaagaactttattgatacttacttggaaaactatccaggtgttcaagcttac
atgaaggatgttgtagagaaagccaaagaagatggttatgtagaaaccctattcaaccgt
cgtcgctacctacctgatttgaagtcgaagaactttaacgtacgttcatttgctgaacgt
aatgccatgaatacgccaattcaagggacggcggcggatatcattaaaatagccatggtg
aagatggatgaagcgttaaaagaacataagttaaaagccaatctattattacaaatccat
gatgagttggtctttgaagtgccaaaagatgaaattgatacactagaaaaattagtgacg
gaagtcatggggtcagcagcccaactagatgtgccattagaaattgaatctaattacggt
gcaacttggtatgaagctaaataa
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