Carnobacterium sp. PL17GRE32: FPV25_08360
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Entry
FPV25_08360 CDS
T06316
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
carn
Carnobacterium sp. PL17GRE32
Brite
KEGG Orthology (KO) [BR:
carn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carn03019
]
FPV25_08360
Messenger RNA biogenesis [BR:
carn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FPV25_08360
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GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QEM54941
UniProt:
A0A9W7S3D9
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Position
complement(1798329..1799372)
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AA seq
347 aa
AA seq
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MDNLQLFDVALDQNFDIFVLIKVAEVREDRNGKKYISFTFQDRSGSIEGKFWGATDEDIE
QYTSGQVVALAGKRELYNGKPQVRINGLRLATDGEPNDPSDYVERGPMTRTEMVNEVLAA
VEGFENTTIDAIVRYLLREVSWDFFTYPAAKKNHHAYVGGLGFHTISMLRLAQAVVSQYD
NINKDLLYAGVIIHDIGKTVEFTDPMSTEYTVEGNLIGHISIVEEMITLAVDKLGFDQYS
EDVVLLKHMVLAHHGKQEWGSPVSPHLLEAEILHHLDNLDASIQMMTTALDHTEPGEFSA
RIFGMDNRAFYKPKGQVATEESQTLDQEDEEITLDFQDSNDDLPFFE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacaacttacaactttttgatgtggctttagaccaaaatttcgatatctttgtattg
attaaagttgccgaagtacgggaagaccgtaacggtaaaaagtacatctcattcacattc
caagaccggtctggctcaatcgagggcaagttttggggagcaactgacgaagatattgaa
caatatacttctggccaagtagttgccttagcgggtaaacgagaactttataacgggaaa
ccacaagttcgtattaatggtcttcgcctagccactgacggggaacccaatgatccctct
gactatgttgaacgtgggccaatgaccagaacggaaatggtgaacgaagtattggctgca
gtggaaggttttgaaaataccaccattgacgccatcgttcgttacctattacgtgaagtg
tcatgggatttctttacctacccagcagcgaagaagaaccaccacgcctatgtaggtggt
ttaggctttcataccatttcaatgcttcgcttagcccaagccgttgtcagccaatacgat
aacatcaacaaagacttattgtatgctggtgtgattattcatgatatcggcaaaacagtc
gaattcactgatccgatgtctactgaatatactgttgaggggaatcttattggacatatc
tcaattgtcgaagagatgataactcttgccgttgataaattagggttcgaccagtacagc
gaagacgttgtcttgttgaaacatatggtattagcccaccacggtaaacaagaatggggt
agcccagtgtcaccgcatttattagaagctgaaatcctacatcatttagacaacttagat
gcttctattcaaatgatgacaactgctttggaccatacagaacctggcgaattttcagcc
cgcattttcggtatggacaaccgggccttctataagccgaaagggcaagtagctacggaa
gaaagtcaaactctagaccaagaagacgaggaaattaccctagatttccaagattcaaat
gatgacctgccattttttgaataa
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