Citrobacter arsenatis: E1B03_01285
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Entry
E1B03_01285 CDS
T07503
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B03_01285 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_01285 (rhlB)
Enzymes [BR:
cars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E1B03_01285 (rhlB)
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E1B03_01285 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBM21148
UniProt:
A0A4P6WKH8
LinkDB
All DBs
Position
complement(70850..72118)
Genome browser
AA seq
422 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPTTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIVFANTKHRCEDIWGNLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGGAPRNRRR
SG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
atagaagcccttgaaaataaaggctttcataactgcacgcccattcaggccctcgcgctg
ccgctaacgctggcaggtcgtgatgttgcagggcaggcgcaaaccggtaccggaaaaacg
atggcgttccttacgtcaacgtttcattatcttctctctcatcccgcgattgccgatcgc
aaggtgaaccaaccgcgtgcgttaattatggcgccaacgcgtgagttagccgtgcagatc
cacgccgacgccgagccgctggcacagactaccggtctgaaattaggcctggcttatggc
ggcgacggttatgacaaacagctgaaagtgctggaaagcggcgtcgatattcttatcggc
acaactggtcgtctcatcgactatgcaaaacagaaccacattaacctgggcgcgattcag
gtcgtggtgctggatgaagccgatcgtatgtacgatctgggctttattaaagatatccgt
tggctgttccgtcgtatgccgccaaccacacaacgtctgaacatgttgttttctgcaacc
ctctcttaccgcgttcgcgaactggcgttcgaacagatgaacaacgccgagtatgtagaa
gttgaaccggaacagaagacaggtcaccgtattaaagaagaactcttctatccttccaac
gaagagaaaatgcgtttgctgcaaacgctgattgaagaagagtggccagatcgcgccatc
gtctttgctaacaccaagcatcgttgtgaagatatctggggcaaccttgccgctgacggt
catcgcgtcggtctgctgaccggtgacgtggcgcagaaaaaacgtctgcgtattctggat
gaattcacccgtggcgatctcgacattctcgttgcgacggatgtcgccgcacgtggtcta
catatcccagccgtaacgcacgtatttaactatgacctgccggatgattgtgaagattac
gttcaccgtatcggtcgtaccggacgcgcaggtgcaagcggtcactctatcagccttgcc
tgtgaagaatacgcgctgaatttacccgcaatcgagacctatatcggccactcaatcccg
gtcagcaagtacaacccggatgcgctgatgaccgatctgccgaagccgttacgcttaacg
cgtccacgcacaggcaatggcccacgccgtaccggtggtgctccgcgtaatcgtcgtcgt
tcaggttaa
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