Citrobacter arsenatis: E1B03_01300
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Entry
E1B03_01300 CDS
T07503
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cars
Citrobacter arsenatis
Pathway
cars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B03_01300 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cars03021
]
E1B03_01300 (rho)
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_01300 (rho)
Transcription machinery [BR:
cars03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E1B03_01300 (rho)
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E1B03_01300 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QBM21150
UniProt:
A0A4V1A9K3
LinkDB
All DBs
Position
72929..74188
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atgggccttgaaaacctggctcgtatgcgcaagcaggacattatttttgccatcctgaag
cagcacgcaaagagtggcgaagatatctttggtgacggtgtgctggagatattgcaggat
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcctgatgacatctac
gtttctcccagccaaatccgccgtttcaacctccgcactggtgataccatctctggtaag
attcgcccgccgaaagaaggtgaacgctactttgcgctgttgaaagttaacgaagttaac
tacgacaaaccggaaaatgcccgtaacaaaatcctctttgagaacttaaccccgctgcac
gcaaactctcgtctgcgtatggaacgtggtaatggttctacagaagacttaacggcgcgt
gtactggatctggcatcgccgatcggtcgtggccaacgtggtctgattgttgctccgccg
aaagcgggtaaaaccatgctgctgcagaacattgcgcagagcattgcttacaaccatccg
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagttaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttctacctttgacgaaccagcctcccgccacgtt
caggttgctgaaatggttatcgagaaggcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgcttgactccatcactcgtctggcgcgtgcttacaacaccgtagtaccggct
tccggtaaagttctgaccggtggtgtggatgctaacgccctgcatcgtccgaagcgtttc
ttcggtgctgcgcgtaacgtggaagaaggcggtagcctgaccatcatcgcaactgcgctg
atcgataccggctctaaaatggatgaagttatctacgaagagtttaaaggtaccggcaac
atggaactgcatctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccgatgggtgaaatcgacgccatggaattcctcatt
aacaagctggcgatgaccaagaccaatgacgacttcttcgatatgatgaagcgttcctga
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