Citrobacter arsenatis: E1B03_01470
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Entry
E1B03_01470 CDS
T07503
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cars
Citrobacter arsenatis
Pathway
cars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B03_01470 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cars03019
]
E1B03_01470 (recQ)
03400 DNA repair and recombination proteins [BR:
cars03400
]
E1B03_01470 (recQ)
Enzymes [BR:
cars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E1B03_01470 (recQ)
Messenger RNA biogenesis [BR:
cars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E1B03_01470 (recQ)
DNA repair and recombination proteins [BR:
cars03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E1B03_01470 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QBM21176
UniProt:
A0A4P6WH39
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All DBs
Position
107386..109215
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AA seq
609 aa
AA seq
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MAQAEVLNLEMGAKQVLQETFGYQQFRPGQEEIIDTVISGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVAL
TATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAHHSALQLTEAARPVLRGDVPLQLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaaatgggcgctaaacaggttttgcaggaaacc
tttggctaccaacagtttcgccccggtcaggaagaaatcattgataccgtgatctctggt
cgtgactgcctggtcgttatgccgaccggtggcggtaaatccctgtgctatcaaattccc
gcattattgcttaacggactcaccgttgtcgtttcgccgctgatttccctgatgaaagat
caggtcgatcaactgctggccaacggcgtggcggctgcgtgtctgaactccacccaaagt
cgtgagcagcagcttgaggtcatggcaggctgtcgcagtgggcagattcgcttactgtac
attgcgcccgaacgcctgatgctggataacttccttgagcatctggcgcactggaatccg
gtgctgctggcggttgatgaagcgcactgtatctcgcagtgggggcatgatttccgcccg
gaatatgccgcgctgggacaattgcgtcagcgtttcccaaccctgccgtttgtggcgctg
accgctaccgcggatgaaaccacccggctggatattgtgcgtctgctgggactcaatgac
ccgttaattcagatcagcagctttgatcgtccgaatattcgctacatgctgatggagaaa
tttaagccgctcgatcagctgatgcgctacgtgcaagagcagcgcggtaagtccggtatt
atctactgtaacagccgcgccaaagtcgaagacaccgccgcgcgtctgcaaagccgtggc
atcagcgctggggcttaccatgccgggctggaaaacgccgtacgcgctgaagtgcaggag
aaattccagcgcgatgacctgcaaatcgtggtggcgaccgtggcatttgggatgggaatc
aacaaacctaacgtacgcttcgtggtgcatttcgacattccgcgcaacatcgaatcctac
taccaggaaacaggccgtgccggacgtgacggcctgccggcggaagcaatgctgttttac
gatccggctgatatggcatggctgcgccgttgcctcgaagagaaacctgccggacagctt
ctggatatcgaacggcataagctcaatgcgatgggggcgtttgctgaggcgcaaacctgt
cgtcgtctggtgctgctgaactattttggcgaagggcgccaggagccgtgtggtaactgc
gacatctgcctcgatccgccaaaacagtacgacggactcatggatgcgcgcaaagcgctg
tcgactatctaccgagtgaatcaacgctttggtatgggttacgtcgtggaggttctgcgc
ggagcgaataaccagcgtattcgcgaactggcccatgacaagctgccggtctatggcatt
ggccgcgagcaaagccacgaacattgggttagcgttattcgccagcttattcatcttggt
ctggtgacgcagaatattgctcatcactctgcgttacagctaaccgaagccgcgcgcccg
gtgctgcgtggtgacgttccactacagcttgcggtaccgcgtattgtggcgctgaaaccg
cgggtgatgcagaaatccttcggtggcaactatgaccgcaaactgttcgccaaattgcgt
aagctgcgtaaagccattgccgatgaagagaatatcccgccgtacgtggtgttcaacgac
gcgacgctgattgaaatggccgagcagatgccggtttcagcgagcgaaatgctgagcgtc
aacggcgtagggatgcgtaaacttgagcgttttggcaaagagtttatggcgcttattcgc
gcgcacgttgatggtgacgacgaagagtag
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